Strain Fitness in Marinobacter adhaerens HP15 around HP15_2357
Experiment: monoculture; Experiment B, time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 2 |
---|---|---|---|---|---|
remove | |||||
2,482,017 | - | -1.1 | |||
2,482,098 | + | -0.2 | |||
2,482,223 | + | +0.2 | |||
2,482,264 | - | HP15_2356 | 0.13 | -1.4 | |
2,482,331 | + | HP15_2356 | 0.21 | -0.3 | |
2,482,331 | + | HP15_2356 | 0.21 | -1.8 | |
2,482,400 | - | HP15_2356 | 0.29 | -0.3 | |
2,482,499 | + | HP15_2356 | 0.41 | -0.5 | |
2,482,529 | + | HP15_2356 | 0.44 | -0.1 | |
2,482,617 | + | HP15_2356 | 0.54 | -0.6 | |
2,482,861 | + | HP15_2356 | 0.83 | -0.7 | |
2,482,988 | + | -1.2 | |||
2,483,081 | - | -0.0 | |||
2,483,339 | - | HP15_2357 | 0.42 | -0.1 | |
2,483,345 | - | HP15_2357 | 0.43 | -2.9 | |
2,483,348 | - | HP15_2357 | 0.43 | -0.7 | |
2,483,412 | - | HP15_2357 | 0.51 | -0.3 | |
2,483,443 | + | HP15_2357 | 0.55 | -0.8 | |
2,483,443 | + | HP15_2357 | 0.55 | -1.2 | |
2,483,467 | + | HP15_2357 | 0.58 | -0.4 | |
2,483,657 | - | HP15_2357 | 0.82 | -0.5 | |
2,483,774 | + | -1.5 | |||
2,483,774 | + | -0.5 | |||
2,483,775 | + | -1.6 | |||
2,483,809 | - | +0.5 | |||
2,483,928 | + | -0.5 |
Or see this region's nucleotide sequence