Strain Fitness in Marinobacter adhaerens HP15 around HP15_1260

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
1,319,441	-				+0.4
1,319,535	-				-1.9
1,319,584	+		HP15_1259	0.15	-1.0
1,319,621	-		HP15_1259	0.19	-0.8
1,319,621	-		HP15_1259	0.19	-1.5
1,319,687	+		HP15_1259	0.26	+0.8
1,319,687	+		HP15_1259	0.26	+1.3
1,319,743	-		HP15_1259	0.32	+0.7
1,319,983	+		HP15_1259	0.57	+2.0
1,320,085	-		HP15_1259	0.68	-0.3
1,320,112	+		HP15_1259	0.71	-1.3
1,320,112	+		HP15_1259	0.71	+0.8
1,320,141	-		HP15_1259	0.74	+0.4
1,320,158	+		HP15_1259	0.76	+0.8
1,320,158	+		HP15_1259	0.76	-1.3
1,320,361	+				+0.4
1,320,369	-				+0.2
1,320,397	+				+3.5
1,320,591	+		HP15_1260	0.26	-0.8
1,320,599	-		HP15_1260	0.27	-0.9
1,320,695	-		HP15_1260	0.42	+0.8
1,320,695	-		HP15_1260	0.42	-1.9
1,320,706	-		HP15_1260	0.44	-1.1
1,320,715	+		HP15_1260	0.45	-0.2
1,320,791	+		HP15_1260	0.58	-0.4
1,320,791	+		HP15_1260	0.58	+0.2
1,320,955	+		HP15_1260	0.84	-0.5
1,320,963	-		HP15_1260	0.85	-0.9
1,320,997	+				-0.5
1,321,054	+				+0.1
1,321,054	+				-1.2
1,321,106	-				-2.0
1,321,217	+		HP15_1261	0.29	-0.7
1,321,474	+		HP15_1261	0.75	-0.4
1,321,474	+		HP15_1261	0.75	-1.2
1,321,595	+				-1.0