Strain Fitness in Marinobacter adhaerens HP15 around HP15_3997

Experiment: monoculture; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 1
4,226,777	+		HP15_3996	0.40	+0.3
4,226,796	-		HP15_3996	0.42	+1.2
4,226,857	-		HP15_3996	0.46	+0.7
4,226,857	-		HP15_3996	0.46	+0.7
4,226,857	-		HP15_3996	0.46	+0.3
4,226,857	-		HP15_3996	0.46	-0.2
4,227,064	-		HP15_3996	0.59	+0.4
4,227,069	-		HP15_3996	0.60	+0.4
4,227,069	-		HP15_3996	0.60	+1.8
4,227,079	+		HP15_3996	0.60	+0.0
4,227,082	-		HP15_3996	0.60	-0.6
4,227,194	-		HP15_3996	0.68	+0.1
4,227,265	+		HP15_3996	0.72	-0.6
4,227,300	+		HP15_3996	0.75	-1.2
4,227,310	+		HP15_3996	0.75	-0.1
4,227,377	+		HP15_3996	0.80	-0.1
4,227,377	+		HP15_3996	0.80	-0.5
4,227,385	-		HP15_3996	0.80	+0.4
4,227,385	-		HP15_3996	0.80	+0.2
4,227,492	-		HP15_3996	0.87	-1.5
4,227,532	+				-0.2
4,227,548	-				+0.4
4,227,628	+				+0.7
4,227,636	-				-0.2
4,227,669	+				+0.8
4,227,678	+				-1.2
4,227,678	+				+0.5
4,227,692	-				-0.5
4,227,724	+				+0.4
4,227,763	-		HP15_3997	0.11	-1.2
4,227,777	-		HP15_3997	0.12	+0.0
4,227,808	+		HP15_3997	0.16	+0.5
4,227,821	-		HP15_3997	0.17	+1.0
4,227,821	-		HP15_3997	0.17	-0.5
4,228,014	-		HP15_3997	0.39	+0.0
4,228,026	-		HP15_3997	0.40	-0.3
4,228,105	-		HP15_3997	0.49	-0.8
4,228,151	-		HP15_3997	0.54	+0.5
4,228,194	+		HP15_3997	0.58	+0.0
4,228,202	-		HP15_3997	0.59	+0.5
4,228,202	-		HP15_3997	0.59	-0.2
4,228,282	-		HP15_3997	0.68	-0.7
4,228,388	-		HP15_3997	0.80	+0.6
4,228,463	+		HP15_3997	0.88	-0.0
4,228,571	-				+0.5
4,228,596	+				-0.7
4,228,604	-				-0.3
4,228,604	-				-0.7
4,228,660	-				-1.7
4,228,675	+				-0.7
4,228,699	+				-0.2
4,228,699	+				+0.7
4,228,707	-				-1.2
4,228,810	+		HP15_3998	0.16	+0.5
4,228,823	+		HP15_3998	0.18	-1.0
4,228,872	-		HP15_3998	0.22	+0.5
4,228,885	-		HP15_3998	0.23	+0.3
4,228,923	+		HP15_3998	0.27	-1.3
4,228,931	-		HP15_3998	0.28	+0.3
4,228,934	+		HP15_3998	0.28	+0.9
4,228,934	+		HP15_3998	0.28	+0.1
4,228,942	-		HP15_3998	0.29	-0.5
4,228,944	+		HP15_3998	0.29	-0.2
4,229,072	-		HP15_3998	0.41	-0.3
4,229,117	+		HP15_3998	0.45	+0.2
4,229,117	+		HP15_3998	0.45	-0.2
4,229,124	-		HP15_3998	0.46	-0.6
4,229,131	-		HP15_3998	0.46	+0.9
4,229,229	+		HP15_3998	0.56	+0.3
4,229,229	+		HP15_3998	0.56	+0.1
4,229,251	+		HP15_3998	0.58	-0.1
4,229,251	+		HP15_3998	0.58	-0.1
4,229,274	-		HP15_3998	0.60	-0.6
4,229,339	+		HP15_3998	0.66	-0.6
4,229,494	-		HP15_3998	0.80	+0.4
4,229,546	+		HP15_3998	0.85	+0.2
4,229,554	-		HP15_3998	0.86	-0.2