Strain Fitness in Marinobacter adhaerens HP15 around HP15_3786

Experiment: monoculture; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 1
4,006,903	-		HP15_3785	0.37	+1.2
4,006,921	+		HP15_3785	0.39	+0.4
4,007,003	-		HP15_3785	0.46	-1.7
4,007,022	-		HP15_3785	0.47	+1.9
4,007,048	-		HP15_3785	0.49	-0.2
4,007,075	+		HP15_3785	0.52	-0.3
4,007,083	-		HP15_3785	0.52	-0.0
4,007,093	-		HP15_3785	0.53	-0.1
4,007,197	+		HP15_3785	0.62	-0.1
4,007,206	-		HP15_3785	0.63	-1.5
4,007,275	-		HP15_3785	0.69	-0.6
4,007,298	+		HP15_3785	0.71	+1.7
4,007,298	+		HP15_3785	0.71	-0.0
4,007,390	-		HP15_3785	0.79	+0.3
4,007,450	+		HP15_3785	0.84	+1.5
4,007,450	+		HP15_3785	0.84	+0.6
4,007,458	-		HP15_3785	0.84	+1.3
4,007,571	-				+0.1
4,007,592	+				+0.4
4,007,678	-				-0.4
4,007,692	+				-0.0
4,007,742	+				-0.7
4,007,865	-				-0.2
4,007,885	-				+1.0
4,007,937	-		HP15_3786	0.10	-2.2
4,007,977	-		HP15_3786	0.14	+0.1
4,008,053	+		HP15_3786	0.20	-1.0
4,008,084	-		HP15_3786	0.23	-2.1
4,008,193	-		HP15_3786	0.32	-0.5
4,008,239	-		HP15_3786	0.35	-0.1
4,008,304	-		HP15_3786	0.41	-0.1
4,008,373	-		HP15_3786	0.47	-0.3
4,008,406	-		HP15_3786	0.49	+0.9
4,008,436	+		HP15_3786	0.52	-1.3
4,008,436	+		HP15_3786	0.52	+1.1
4,008,460	+		HP15_3786	0.54	-2.0
4,008,568	+		HP15_3786	0.63	-0.2
4,008,619	+		HP15_3786	0.67	-1.9
4,008,698	-		HP15_3786	0.74	-0.2
4,008,748	+		HP15_3786	0.78	-0.9
4,008,767	-		HP15_3786	0.79	-0.6
4,008,837	-		HP15_3786	0.85	+0.5
4,008,902	+				-0.5
4,009,050	+				+0.2
4,009,066	+		HP15_3787	0.10	-0.3
4,009,082	-		HP15_3787	0.14	-0.9
4,009,096	+		HP15_3787	0.18	-0.9
4,009,127	+		HP15_3787	0.26	-1.0
4,009,130	+		HP15_3787	0.27	-0.7
4,009,138	-		HP15_3787	0.29	-1.5
4,009,157	-		HP15_3787	0.34	-0.8
4,009,258	-		HP15_3787	0.61	-0.9
4,009,258	-		HP15_3787	0.61	-0.9
4,009,295	+		HP15_3787	0.70	-0.8
4,009,507	+				+0.2
4,009,507	+				+0.4
4,009,515	-				+0.4
4,009,515	-				-0.7
4,009,515	-				-2.6
4,009,520	-				+0.1
4,009,520	-				-0.1
4,009,724	+		HP15_3788	0.18	+0.2
4,009,746	+		HP15_3788	0.19	+0.3
4,009,751	+		HP15_3788	0.19	+0.6
4,009,751	+		HP15_3788	0.19	+0.5
4,009,751	+		HP15_3788	0.19	+0.5
4,009,754	-		HP15_3788	0.20	+0.8
4,009,764	-		HP15_3788	0.20	-0.1
4,009,869	-		HP15_3788	0.28	-0.2
4,009,899	+		HP15_3788	0.30	-0.1
4,009,994	+		HP15_3788	0.36	-0.6
4,009,996	+		HP15_3788	0.37	+0.2