Strain Fitness in Marinobacter adhaerens HP15 around HP15_3512

Experiment: monoculture; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 1
3,693,940	+				+0.8
3,694,090	-		HP15_3511	0.21	+1.8
3,694,134	-		HP15_3511	0.26	+1.8
3,694,200	+		HP15_3511	0.34	-1.5
3,694,200	+		HP15_3511	0.34	+0.8
3,694,210	+		HP15_3511	0.35	-1.0
3,694,627	+		HP15_3511	0.83	+1.8
3,694,655	+		HP15_3511	0.86	+1.8
3,694,687	-		HP15_3511	0.90	-0.2
3,694,715	-				-1.4
3,694,822	+				+0.4
3,694,894	-				-0.9
3,695,036	+		HP15_3512	0.22	-2.0
3,695,036	+		HP15_3512	0.22	-1.0
3,695,044	-		HP15_3512	0.23	-2.4
3,695,163	+		HP15_3512	0.36	-0.4
3,695,431	+		HP15_3512	0.64	-2.0
3,695,449	-		HP15_3512	0.66	-2.2
3,695,471	+		HP15_3512	0.68	-3.0
3,695,561	-		HP15_3512	0.77	-2.3
3,695,564	+		HP15_3512	0.78	-3.0
3,695,572	-		HP15_3512	0.78	-2.5
3,695,572	-		HP15_3512	0.78	-2.0
3,695,614	-		HP15_3512	0.83	-3.1
3,695,614	-		HP15_3512	0.83	+0.5
3,695,685	+				-2.3
3,695,693	-				-3.0
3,695,703	-				-1.8
3,695,801	-				-1.2
3,695,824	-				-0.1
3,695,837	+				-0.9
3,695,870	+				-0.0
3,695,887	-				+1.1
3,695,887	-				-0.2
3,695,933	-				+0.8
3,695,987	-				+0.8
3,696,006	+				+0.9
3,696,006	+				+1.0
3,696,006	+				+0.5
3,696,006	+				-0.6
3,696,014	-				+0.0
3,696,014	-				-0.2
3,696,014	-				+1.8
3,696,065	-				+0.9
3,696,067	+				+0.7
3,696,166	+		HP15_3513	0.23	+2.5
3,696,201	-		HP15_3513	0.32	+0.6
3,696,260	-		HP15_3513	0.47	-0.0
3,696,281	-		HP15_3513	0.52	+0.0
3,696,296	-		HP15_3513	0.56	-0.5
3,696,349	+		HP15_3513	0.70	+0.6
3,696,370	+		HP15_3513	0.75	+1.0
3,696,387	+		HP15_3513	0.79	-0.1
3,696,392	+		HP15_3513	0.81	-1.4
3,696,393	+		HP15_3513	0.81	+0.2
3,696,425	+		HP15_3513	0.89	+1.2
3,696,425	+		HP15_3513	0.89	+0.3
3,696,425	+		HP15_3513	0.89	+1.1
3,696,425	+		HP15_3513	0.89	+0.4
3,696,433	-				+0.6
3,696,433	-				-1.2
3,696,433	-				+1.3
3,696,433	-				+0.8
3,696,568	+		HP15_3514	0.19	+0.4
3,696,590	+		HP15_3514	0.25	+0.6
3,696,590	+		HP15_3514	0.25	+1.3
3,696,678	+		HP15_3514	0.49	+0.6
3,696,678	+		HP15_3514	0.49	+0.1
3,696,708	-		HP15_3514	0.57	-0.1