Strain Fitness in Marinobacter adhaerens HP15 around HP15_3403

Experiment: monoculture; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 1
3,573,767	+				-1.8
3,573,782	+				+0.6
3,573,829	+				-0.3
3,573,916	+				+1.0
3,573,945	+				-0.2
3,573,945	+				+0.5
3,573,945	+				-0.0
3,573,945	+				+0.7
3,573,945	+				+1.3
3,573,945	+				-2.1
3,574,114	-				+0.4
3,574,116	+				+0.6
3,574,125	-				-0.2
3,574,255	-		HP15_3403	0.13	-0.5
3,574,315	+		HP15_3403	0.16	+1.2
3,574,421	-		HP15_3403	0.21	-2.0
3,574,452	+		HP15_3403	0.22	-2.5
3,574,452	-		HP15_3403	0.22	-2.5
3,574,549	-		HP15_3403	0.27	-2.9
3,574,621	+		HP15_3403	0.30	-0.5
3,574,621	+		HP15_3403	0.30	-0.4
3,574,748	+		HP15_3403	0.36	-1.2
3,574,766	+		HP15_3403	0.37	-0.5
3,574,777	+		HP15_3403	0.37	-0.7
3,574,777	+		HP15_3403	0.37	+0.8
3,574,786	-		HP15_3403	0.38	-2.5
3,575,048	+		HP15_3403	0.50	-0.5
3,575,048	+		HP15_3403	0.50	+0.5
3,575,056	-		HP15_3403	0.50	+0.2
3,575,236	-		HP15_3403	0.58	-1.1
3,575,271	+		HP15_3403	0.60	-0.8
3,575,376	-		HP15_3403	0.65	-1.9
3,575,380	-		HP15_3403	0.65	-1.0
3,575,538	+		HP15_3403	0.72	-1.1
3,575,726	+		HP15_3403	0.81	-0.7
3,575,799	-		HP15_3403	0.84	+4.1
3,575,993	+				+0.8
3,575,993	+				+2.1
3,576,111	+				-0.1
3,576,213	+				-0.1
3,576,253	+				+0.2
3,576,253	+				+1.3
3,576,256	+				-0.2
3,576,256	+				-0.3
3,576,266	-				+0.1
3,576,266	-				-0.5
3,576,321	+				-0.3
3,576,321	+				-0.3
3,576,321	+				-0.6
3,576,634	+		HP15_3404	0.18	-0.7
3,576,634	+		HP15_3404	0.18	-1.6
3,576,724	+		HP15_3404	0.24	-0.9
3,576,791	+		HP15_3404	0.29	-0.4
3,576,866	-		HP15_3404	0.34	+1.9
3,576,892	-		HP15_3404	0.36	+0.0
3,577,076	+		HP15_3404	0.48	+0.2
3,577,084	-		HP15_3404	0.49	-0.0