Strain Fitness in Marinobacter adhaerens HP15 around HP15_3352

Experiment: monoculture; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 1
3,513,374	+		HP15_3350	0.30	+0.3
3,513,374	+		HP15_3350	0.30	+0.4
3,513,424	-		HP15_3350	0.60	-0.4
3,513,470	+		HP15_3350	0.87	-1.0
3,513,478	-				+0.1
3,513,577	-				+0.4
3,513,594	+				+0.2
3,513,603	-				-0.0
3,513,603	-				+1.2
3,513,642	+				+0.2
3,513,694	+				-1.7
3,513,702	-				+0.8
3,513,711	+				-1.7
3,513,719	-				+0.1
3,513,744	+				-0.3
3,513,785	+				+1.0
3,513,791	+				-0.9
3,514,096	-		HP15_3351	0.61	-1.8
3,514,098	-		HP15_3351	0.61	-5.3
3,514,232	-		HP15_3351	0.85	-2.7
3,514,257	+		HP15_3351	0.90	-0.2
3,514,353	-		HP15_3352	0.10	-2.1
3,514,382	+		HP15_3352	0.16	-2.4
3,514,385	-		HP15_3352	0.16	-7.1
3,514,400	-		HP15_3352	0.19	-7.8
3,514,499	-		HP15_3352	0.36	-3.8
3,514,590	+		HP15_3352	0.52	-5.2
3,514,598	-		HP15_3352	0.54	-4.9
3,514,618	+		HP15_3352	0.57	-4.2
3,514,626	-		HP15_3352	0.59	-6.1
3,514,626	-		HP15_3352	0.59	-7.1
3,514,765	-		HP15_3352	0.84	-6.8
3,514,794	+		HP15_3352	0.89	-4.1
3,514,794	+		HP15_3352	0.89	-0.5
3,514,797	-		HP15_3352	0.89	-7.3
3,514,890	-				-0.1
3,514,932	+				-0.5
3,515,827	-				-0.8
3,515,834	+				-0.1
3,515,842	-				+0.8