Strain Fitness in Marinobacter adhaerens HP15 around HP15_3334

Experiment: monoculture; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 1
3,493,873	-		HP15_3333	0.29	+0.0
3,493,893	+		HP15_3333	0.31	+0.3
3,493,959	-		HP15_3333	0.36	+0.4
3,494,003	+		HP15_3333	0.39	-0.7
3,494,003	+		HP15_3333	0.39	+0.9
3,494,003	+		HP15_3333	0.39	+0.6
3,494,038	+		HP15_3333	0.42	-0.0
3,494,064	-		HP15_3333	0.44	-0.1
3,494,082	+		HP15_3333	0.46	+0.8
3,494,177	-		HP15_3333	0.53	+0.3
3,494,180	+		HP15_3333	0.53	+0.8
3,494,188	-		HP15_3333	0.54	+0.2
3,494,228	+		HP15_3333	0.57	-0.0
3,494,257	+		HP15_3333	0.59	-0.6
3,494,262	+		HP15_3333	0.59	+0.1
3,494,262	+		HP15_3333	0.59	-0.2
3,494,262	+		HP15_3333	0.59	-0.2
3,494,270	-		HP15_3333	0.60	-0.7
3,494,270	-		HP15_3333	0.60	-1.4
3,494,270	-		HP15_3333	0.60	+0.3
3,494,542	-		HP15_3333	0.81	+1.0
3,494,542	-		HP15_3333	0.81	+1.3
3,494,555	-		HP15_3333	0.82	+1.1
3,494,656	+				+0.4
3,494,674	-				-0.3
3,494,720	+				+0.2
3,494,720	+				-1.2
3,494,720	+				-0.2
3,494,728	-				-0.4
3,494,728	-				+0.5
3,494,728	-				+0.8
3,494,865	-				-2.4
3,494,894	-				-3.5
3,494,904	+				-3.3
3,494,959	-				-3.3
3,495,202	+		HP15_3334	0.18	-1.9
3,495,232	-		HP15_3334	0.20	-3.7
3,495,331	+		HP15_3334	0.25	-2.3
3,495,368	+		HP15_3334	0.26	-2.7
3,495,368	+		HP15_3334	0.26	-2.2
3,495,460	-		HP15_3334	0.31	-3.8
3,495,594	-		HP15_3334	0.37	-1.8
3,495,929	-		HP15_3334	0.52	-3.2
3,495,963	-		HP15_3334	0.54	-3.6
3,496,016	-		HP15_3334	0.56	-3.4
3,496,104	-		HP15_3334	0.61	-4.0
3,496,160	+		HP15_3334	0.63	-3.8
3,496,177	-		HP15_3334	0.64	-4.3
3,496,285	-		HP15_3334	0.69	-3.2
3,496,430	-		HP15_3334	0.76	-2.0
3,496,444	-		HP15_3334	0.76	-4.5
3,496,489	-		HP15_3334	0.79	-3.4
3,496,536	-		HP15_3334	0.81	-2.6
3,496,576	-		HP15_3334	0.83	-2.8
3,496,604	+		HP15_3334	0.84	-3.5
3,496,854	+				-1.7
3,496,973	-				+0.5
3,496,996	-				+0.7
3,497,021	-				+0.5