Strain Fitness in Marinobacter adhaerens HP15 around HP15_3240

Experiment: monoculture; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 1
3,393,433	-		HP15_3239	0.54	-0.1
3,393,460	+		HP15_3239	0.55	+0.4
3,393,497	+		HP15_3239	0.57	+0.9
3,393,512	+		HP15_3239	0.58	+0.7
3,393,518	+		HP15_3239	0.58	+0.2
3,393,523	+		HP15_3239	0.58	+0.1
3,393,526	-		HP15_3239	0.58	+0.7
3,393,585	-		HP15_3239	0.61	-0.4
3,393,611	+		HP15_3239	0.63	-0.1
3,393,611	+		HP15_3239	0.63	+0.9
3,393,611	+		HP15_3239	0.63	-1.6
3,393,611	+		HP15_3239	0.63	+0.5
3,393,619	-		HP15_3239	0.63	-0.5
3,393,729	-		HP15_3239	0.69	+0.7
3,393,806	+		HP15_3239	0.73	-0.1
3,393,843	+		HP15_3239	0.75	+0.2
3,393,936	+		HP15_3239	0.79	+0.4
3,393,944	-		HP15_3239	0.80	-0.8
3,393,981	+		HP15_3239	0.82	+0.5
3,394,131	-		HP15_3239	0.89	+1.3
3,394,282	-				+1.1
3,394,340	-				-0.8
3,394,438	+				-0.4
3,394,477	+				+0.3
3,394,517	+				+0.3
3,394,567	+				+0.3
3,394,596	-		HP15_3240	0.11	+0.6
3,394,596	-		HP15_3240	0.11	-1.2
3,394,752	+		HP15_3240	0.20	+0.6
3,394,780	+		HP15_3240	0.22	-1.9
3,394,798	-		HP15_3240	0.23	+0.4
3,394,877	-		HP15_3240	0.27	-0.1
3,395,074	+		HP15_3240	0.39	-1.3
3,395,193	+		HP15_3240	0.46	+0.5
3,395,193	+		HP15_3240	0.46	+0.5
3,395,193	+		HP15_3240	0.46	+0.2
3,395,337	-		HP15_3240	0.54	+0.5
3,395,557	+		HP15_3240	0.67	-2.4
3,395,565	-		HP15_3240	0.67	+0.7
3,395,587	-		HP15_3240	0.69	+1.0
3,395,639	+		HP15_3240	0.72	+0.1
3,395,720	-		HP15_3240	0.76	-0.2
3,395,843	+		HP15_3240	0.84	-0.9
3,395,862	-		HP15_3240	0.85	+1.1
3,395,872	-		HP15_3240	0.85	-0.1
3,395,882	-		HP15_3240	0.86	-1.2
3,395,984	+				-0.9
3,396,024	-				-0.1
3,396,133	+				-0.7
3,396,141	-				+0.6
3,396,262	-				-1.9
3,396,526	-				-0.3
3,396,570	+				+0.6
3,396,594	+		HP15_3242	0.12	+1.0
3,396,616	+		HP15_3242	0.14	-0.2
3,396,704	+		HP15_3242	0.23	-0.6
3,396,705	+		HP15_3242	0.23	+1.1
3,396,712	-		HP15_3242	0.24	+0.9
3,396,721	+		HP15_3242	0.25	-2.1
3,396,771	+		HP15_3242	0.29	+1.2
3,396,779	-		HP15_3242	0.30	-0.2
3,396,781	+		HP15_3242	0.30	-0.2
3,396,789	-		HP15_3242	0.31	+0.9
3,396,980	+		HP15_3242	0.50	+0.8
3,396,988	-		HP15_3242	0.51	-0.2
3,397,011	+		HP15_3242	0.53	-0.1
3,397,011	+		HP15_3242	0.53	+0.2
3,397,011	+		HP15_3242	0.53	-0.2
3,397,019	-		HP15_3242	0.54	-0.8
3,397,050	+		HP15_3242	0.57	-0.6