Strain Fitness in Marinobacter adhaerens HP15 around HP15_2080

Experiment: monoculture; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 1
2,178,249	-		HP15_2078	0.20	+0.4
2,178,249	-		HP15_2078	0.20	+0.8
2,178,276	-		HP15_2078	0.24	-0.2
2,178,294	+		HP15_2078	0.26	-0.1
2,178,294	+		HP15_2078	0.26	+0.8
2,178,302	-		HP15_2078	0.27	-0.1
2,178,631	+		HP15_2078	0.74	+0.4
2,178,721	-		HP15_2078	0.86	+0.1
2,178,787	+				-0.7
2,178,805	-				-1.3
2,178,805	-				-1.0
2,179,221	+				-0.6
2,179,221	+				+0.2
2,179,407	-				+0.4
2,179,549	-		HP15_2080	0.14	-1.4
2,179,639	-		HP15_2080	0.18	-2.7
2,179,639	-		HP15_2080	0.18	-3.8
2,179,664	-		HP15_2080	0.19	-1.5
2,179,940	+		HP15_2080	0.32	-1.5
2,179,981	+		HP15_2080	0.33	-0.9
2,180,068	+		HP15_2080	0.37	-1.3
2,180,219	+		HP15_2080	0.44	-2.1
2,180,429	+		HP15_2080	0.53	-2.3
2,180,434	+		HP15_2080	0.53	-1.8
2,180,435	-		HP15_2080	0.53	-2.1
2,180,437	-		HP15_2080	0.53	-2.0
2,180,498	-		HP15_2080	0.56	+0.4
2,180,645	-		HP15_2080	0.63	-0.5
2,180,883	+		HP15_2080	0.73	-2.3
2,180,949	-		HP15_2080	0.76	-3.3
2,180,968	-		HP15_2080	0.77	-0.9
2,181,054	+		HP15_2080	0.81	-0.3
2,181,090	+		HP15_2080	0.82	-3.2
2,181,218	+		HP15_2080	0.88	-0.6
2,181,226	-		HP15_2080	0.88	-1.6
2,181,226	-		HP15_2080	0.88	-0.8
2,181,245	+		HP15_2080	0.89	-1.4
2,181,418	+				-2.6
2,181,465	-				-1.6
2,181,509	-				+1.2
2,181,516	+				-1.8
2,181,540	-		HP15_2081	0.11	-0.8
2,181,559	+		HP15_2081	0.19	-0.3
2,181,562	+		HP15_2081	0.21	-0.4
2,181,614	-		HP15_2081	0.43	+0.1
2,181,614	-		HP15_2081	0.43	-0.6
2,181,643	-		HP15_2081	0.55	-0.9
2,181,643	-		HP15_2081	0.55	+0.2
2,181,748	+				-0.2
2,181,801	-				-0.5
2,182,316	+		HP15_2082	0.44	-0.3
2,182,316	+		HP15_2082	0.44	-0.5
2,182,316	+		HP15_2082	0.44	-0.3
2,182,324	-		HP15_2082	0.46	-0.1
2,182,370	-		HP15_2082	0.61	-0.7
2,182,479	+				+0.1
2,182,487	-				-0.5