Strain Fitness in Marinobacter adhaerens HP15 around HP15_1298
Experiment: monoculture; Experiment B, time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 1 |
---|---|---|---|---|---|
remove | |||||
1,357,764 | + | +1.0 | |||
1,357,764 | + | -0.0 | |||
1,357,764 | + | -0.6 | |||
1,357,764 | + | -0.1 | |||
1,357,772 | - | +0.4 | |||
1,357,772 | - | +0.0 | |||
1,357,772 | - | -0.1 | |||
1,357,804 | + | +1.4 | |||
1,358,248 | + | HP15_1297 | 0.59 | +2.9 | |
1,358,256 | - | HP15_1297 | 0.61 | -0.3 | |
1,358,338 | + | HP15_1297 | 0.71 | -0.5 | |
1,358,599 | - | -0.3 | |||
1,358,733 | - | HP15_1298 | 0.16 | -5.3 | |
1,358,902 | + | HP15_1298 | 0.42 | -2.6 | |
1,358,939 | + | HP15_1298 | 0.47 | -3.5 | |
1,359,112 | + | HP15_1298 | 0.73 | -2.8 | |
1,359,150 | + | HP15_1298 | 0.79 | -5.8 | |
1,359,278 | - | +0.2 |
Or see this region's nucleotide sequence