Strain Fitness in Marinobacter adhaerens HP15 around HP15_3665

Experiment: monoculture; Experiment A, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 7
3,861,387	+		HP15_3664	0.37	-0.3
3,861,395	-		HP15_3664	0.38	+0.4
3,861,395	-		HP15_3664	0.38	+0.6
3,861,408	-		HP15_3664	0.39	+0.7
3,861,408	-		HP15_3664	0.39	+0.6
3,861,459	-		HP15_3664	0.43	-0.2
3,861,462	+		HP15_3664	0.43	+0.3
3,861,496	-		HP15_3664	0.46	-0.1
3,861,577	-		HP15_3664	0.52	-0.8
3,861,607	-		HP15_3664	0.55	-2.1
3,861,777	+		HP15_3664	0.68	-0.7
3,861,791	-		HP15_3664	0.69	+2.0
3,861,845	-		HP15_3664	0.73	+0.9
3,861,942	+		HP15_3664	0.81	+0.4
3,862,022	+		HP15_3664	0.87	-0.1
3,862,022	+		HP15_3664	0.87	-0.2
3,862,062	+				-0.3
3,862,062	-				-1.6
3,862,062	-				+0.5
3,862,159	-				-1.6
3,862,252	-				-1.0
3,862,618	+		HP15_3665	0.16	+0.4
3,862,618	+		HP15_3665	0.16	+1.1
3,862,662	+		HP15_3665	0.19	+0.3
3,862,670	-		HP15_3665	0.19	-0.6
3,862,670	-		HP15_3665	0.19	-0.3
3,862,677	+		HP15_3665	0.19	+1.2
3,862,695	-		HP15_3665	0.20	+0.3
3,862,789	-		HP15_3665	0.25	+0.7
3,862,866	-		HP15_3665	0.29	+1.0
3,862,908	+		HP15_3665	0.31	+0.6
3,862,920	+		HP15_3665	0.32	-0.7
3,862,959	+		HP15_3665	0.34	+0.0
3,863,039	+		HP15_3665	0.38	-1.1
3,863,051	-		HP15_3665	0.38	+0.6
3,863,068	+		HP15_3665	0.39	-0.8
3,863,092	-		HP15_3665	0.40	+1.3
3,863,134	-		HP15_3665	0.43	+0.1
3,863,151	+		HP15_3665	0.43	-1.1
3,863,151	+		HP15_3665	0.43	-0.8
3,863,159	-		HP15_3665	0.44	+1.3
3,863,161	+		HP15_3665	0.44	+1.5
3,863,211	+		HP15_3665	0.46	-0.0
3,863,316	+		HP15_3665	0.52	-0.9
3,863,336	+		HP15_3665	0.53	+1.5
3,863,344	-		HP15_3665	0.53	+0.7
3,863,344	-		HP15_3665	0.53	-0.4
3,863,378	+		HP15_3665	0.55	+0.0
3,863,501	+		HP15_3665	0.61	-0.8
3,863,540	+		HP15_3665	0.63	-2.2
3,863,664	+		HP15_3665	0.69	+3.2
3,863,706	-		HP15_3665	0.71	-0.1
3,863,801	+		HP15_3665	0.76	+0.7
3,863,827	+		HP15_3665	0.77	-0.9
3,863,887	+		HP15_3665	0.80	+2.7
3,863,900	-		HP15_3665	0.81	+0.9
3,863,910	-		HP15_3665	0.82	-0.5
3,863,926	-		HP15_3665	0.82	+2.3
3,863,963	-		HP15_3665	0.84	-0.6
3,864,129	+				+0.3
3,864,157	+				+1.4
3,864,162	+				-0.7
3,864,165	-				-0.0
3,864,297	-				+0.9
3,864,309	-				+0.8
3,864,338	+				+0.8
3,864,338	+				+1.0
3,864,356	+				+1.6
3,864,374	-		HP15_3666	0.11	+0.3
3,864,469	-		HP15_3666	0.43	+0.1
3,864,541	+		HP15_3666	0.67	+0.5
3,864,656	-				+0.0
3,864,656	-				+1.0
3,864,656	-				+0.8
3,864,670	+		HP15_3667	0.11	+1.3
3,864,721	-		HP15_3667	0.33	+1.3
3,864,726	+		HP15_3667	0.35	+0.3
3,864,779	+		HP15_3667	0.57	+1.0
3,864,915	+				+0.2
3,864,923	-				+0.2
3,865,019	-				+0.4
3,865,047	-				+0.5
3,865,148	-				+0.9
3,865,166	-				-0.1
3,865,270	+				+1.0