Strain Fitness in Marinobacter adhaerens HP15 around HP15_3461

Experiment: monoculture; Experiment A, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 7
3,641,986	+		HP15_3460	0.71	+0.8
3,641,994	-		HP15_3460	0.72	-1.2
3,642,032	+		HP15_3460	0.73	+0.9
3,642,055	+		HP15_3460	0.74	+0.4
3,642,238	+		HP15_3460	0.81	+1.0
3,642,244	+		HP15_3460	0.81	+1.5
3,642,260	-		HP15_3460	0.82	+1.2
3,642,276	-		HP15_3460	0.82	-0.1
3,642,276	-		HP15_3460	0.82	-0.8
3,642,276	-		HP15_3460	0.82	-0.8
3,642,276	-		HP15_3460	0.82	-0.3
3,642,454	+		HP15_3460	0.89	+0.1
3,642,454	+		HP15_3460	0.89	+1.2
3,642,606	-				-0.0
3,642,619	+				-0.4
3,642,681	-				-0.6
3,642,843	-				-0.6
3,642,856	+				-0.5
3,642,896	+				-0.6
3,642,904	-				-0.6
3,642,927	-				+0.5
3,642,940	-				+0.5
3,642,944	+				-0.3
3,642,958	+				+0.4
3,642,966	-				-0.2
3,643,063	-		HP15_3461	0.13	+0.3
3,643,090	-		HP15_3461	0.16	-1.1
3,643,090	-		HP15_3461	0.16	-0.7
3,643,090	-		HP15_3461	0.16	-0.7
3,643,158	+		HP15_3461	0.24	+0.6
3,643,159	+		HP15_3461	0.24	+0.1
3,643,185	-		HP15_3461	0.27	-3.2
3,643,259	-		HP15_3461	0.35	+0.7
3,643,264	-		HP15_3461	0.36	+0.5
3,643,315	-		HP15_3461	0.42	-0.4
3,643,315	-		HP15_3461	0.42	-2.3
3,643,333	+		HP15_3461	0.44	-0.8
3,643,333	+		HP15_3461	0.44	-2.1
3,643,333	+		HP15_3461	0.44	+0.1
3,643,333	+		HP15_3461	0.44	+0.7
3,643,341	-		HP15_3461	0.45	-0.6
3,643,397	+		HP15_3461	0.51	-1.8
3,643,413	-		HP15_3461	0.53	-0.9
3,643,418	+		HP15_3461	0.54	+0.1
3,643,539	+		HP15_3461	0.67	-0.1
3,643,539	+		HP15_3461	0.67	-0.2
3,643,547	+		HP15_3461	0.68	+1.2
3,643,547	-		HP15_3461	0.68	+0.2
3,643,558	-		HP15_3461	0.70	-1.0
3,643,580	-		HP15_3461	0.72	-0.1
3,643,587	+		HP15_3461	0.73	-0.6
3,643,595	-		HP15_3461	0.74	+2.5
3,643,640	-		HP15_3461	0.79	-0.7
3,643,693	-		HP15_3461	0.85	-2.2
3,643,715	-		HP15_3461	0.88	+0.9
3,643,863	+				+0.4
3,643,903	+				-0.8
3,643,906	-				+1.0
3,643,908	+				+0.2
3,644,018	+				+0.0
3,644,072	-		HP15_3462	0.12	-0.1
3,644,193	-		HP15_3462	0.18	-0.7
3,644,213	-		HP15_3462	0.19	+0.0
3,644,220	+		HP15_3462	0.19	+1.3
3,644,348	+		HP15_3462	0.25	+3.5
3,644,380	+		HP15_3462	0.26	-1.8
3,644,403	+		HP15_3462	0.27	+1.2
3,644,411	-		HP15_3462	0.28	+1.2
3,644,413	+		HP15_3462	0.28	-0.2
3,644,416	-		HP15_3462	0.28	+1.8
3,644,418	-		HP15_3462	0.28	+2.3
3,644,461	-		HP15_3462	0.30	+0.1
3,644,548	-		HP15_3462	0.34	-0.6
3,644,596	+		HP15_3462	0.37	+0.2
3,644,604	-		HP15_3462	0.37	-1.8
3,644,615	-		HP15_3462	0.37	-0.8
3,644,643	+		HP15_3462	0.39	+0.3
3,644,665	+		HP15_3462	0.40	+1.4