Strain Fitness in Marinobacter adhaerens HP15 around HP15_3428

Experiment: monoculture; Experiment A, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 7
3,601,951	+		HP15_3425	0.64	-0.7
3,601,974	+		HP15_3425	0.71	+0.6
3,601,974	+		HP15_3425	0.71	+0.7
3,601,982	-		HP15_3425	0.74	-1.8
3,601,982	-		HP15_3425	0.74	-1.1
3,601,982	-		HP15_3425	0.74	+0.1
3,601,984	+		HP15_3425	0.74	+0.3
3,601,992	-		HP15_3425	0.77	-0.7
3,602,084	+				+0.3
3,602,092	-				+0.3
3,602,124	-				+2.3
3,602,130	+				+1.5
3,602,130	+				-1.1
3,602,146	+				-1.1
3,602,146	+				-0.6
3,602,149	-				-1.0
3,602,149	-				-0.7
3,602,149	-				+1.4
3,602,154	-				-0.1
3,602,159	-		HP15_3426	0.10	-0.6
3,602,193	-		HP15_3426	0.21	+1.0
3,602,209	+		HP15_3426	0.26	-1.2
3,602,217	-		HP15_3426	0.28	-0.2
3,602,265	-		HP15_3426	0.43	-2.0
3,602,332	-		HP15_3426	0.64	+1.1
3,602,352	-		HP15_3426	0.70	-0.0
3,602,372	+		HP15_3426	0.76	-0.6
3,602,481	+				+0.1
3,602,517	+				+0.5
3,602,722	+		HP15_3427	0.44	+2.2
3,602,730	-		HP15_3427	0.46	+2.8
3,602,761	-		HP15_3427	0.54	+2.6
3,602,826	+		HP15_3427	0.70	+1.1
3,602,852	+		HP15_3427	0.77	+3.0
3,602,893	-		HP15_3427	0.87	+2.3
3,602,928	+				-1.7
3,603,009	+				+3.5
3,603,018	+				+4.2
3,603,027	-				+4.1
3,603,037	+				+3.8
3,603,157	+		HP15_3428	0.18	+3.9
3,603,158	+		HP15_3428	0.18	+2.3
3,603,165	+		HP15_3428	0.19	+3.7
3,603,166	-		HP15_3428	0.19	+1.1
3,603,171	-		HP15_3428	0.19	+3.9
3,603,202	+		HP15_3428	0.22	+2.1
3,603,208	-		HP15_3428	0.22	+1.0
3,603,363	+		HP15_3428	0.36	+3.5
3,603,367	-		HP15_3428	0.36	+1.9
3,603,375	+		HP15_3428	0.37	+3.0
3,603,419	+		HP15_3428	0.41	+4.8
3,603,444	-		HP15_3428	0.43	+4.2
3,603,447	+		HP15_3428	0.43	+4.0
3,603,453	+		HP15_3428	0.44	+3.4
3,603,461	-		HP15_3428	0.44	+4.8
3,603,461	-		HP15_3428	0.44	+3.2
3,603,611	+		HP15_3428	0.58	+0.3
3,603,722	+		HP15_3428	0.67	+0.2
3,603,730	-		HP15_3428	0.68	+4.6
3,603,762	-		HP15_3428	0.71	+3.8
3,603,762	-		HP15_3428	0.71	+2.2
3,603,820	+		HP15_3428	0.76	+4.7
3,603,821	-		HP15_3428	0.76	+3.2
3,603,855	+		HP15_3428	0.79	+3.9
3,603,881	+		HP15_3428	0.81	+2.1
3,603,889	-		HP15_3428	0.82	+3.5
3,604,155	-				+0.6
3,604,291	+		HP15_3429	0.11	+2.7
3,604,345	-		HP15_3429	0.14	-0.1
3,604,370	-		HP15_3429	0.15	-0.7
3,604,370	-		HP15_3429	0.15	+1.2
3,604,583	+		HP15_3429	0.28	+2.8
3,604,645	-		HP15_3429	0.31	-1.0
3,604,715	+		HP15_3429	0.35	+1.0
3,604,767	+		HP15_3429	0.38	-0.2
3,604,770	-		HP15_3429	0.39	+1.2
3,604,850	+		HP15_3429	0.43	-0.6
3,604,932	+		HP15_3429	0.48	+2.1
3,604,964	-		HP15_3429	0.50	+0.6
3,605,003	-		HP15_3429	0.52	+0.8
3,605,078	+		HP15_3429	0.57	+0.7
3,605,086	-		HP15_3429	0.57	+1.3