Strain Fitness in Marinobacter adhaerens HP15 around HP15_3404

Experiment: monoculture; Experiment A, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 7
3,575,376	-		HP15_3403	0.65	-2.7
3,575,380	-		HP15_3403	0.65	+0.5
3,575,538	+		HP15_3403	0.72	-1.1
3,575,726	+		HP15_3403	0.81	+0.9
3,575,799	-		HP15_3403	0.84	+3.3
3,575,993	+				+2.3
3,575,993	+				+1.3
3,576,111	+				-2.2
3,576,213	+				-0.6
3,576,253	+				+1.9
3,576,253	+				-0.2
3,576,256	+				-0.2
3,576,256	+				-0.2
3,576,266	-				-0.2
3,576,266	-				-1.2
3,576,321	+				-0.3
3,576,321	+				-1.4
3,576,321	+				+0.5
3,576,634	+		HP15_3404	0.18	+1.4
3,576,634	+		HP15_3404	0.18	+0.7
3,576,724	+		HP15_3404	0.24	-2.2
3,576,791	+		HP15_3404	0.29	+0.1
3,576,866	-		HP15_3404	0.34	+0.9
3,576,892	-		HP15_3404	0.36	-2.4
3,577,076	+		HP15_3404	0.48	+0.4
3,577,084	-		HP15_3404	0.49	-0.2
3,577,141	+		HP15_3404	0.53	-0.1
3,577,200	+		HP15_3404	0.57	+0.9
3,577,299	+		HP15_3404	0.64	+0.3
3,577,399	+		HP15_3404	0.70	-2.8
3,577,399	+		HP15_3404	0.70	-1.9
3,577,457	+		HP15_3404	0.74	+0.3
3,577,519	-		HP15_3404	0.79	+0.2
3,577,534	+		HP15_3404	0.80	-1.7
3,577,537	-		HP15_3404	0.80	-0.8
3,577,559	-		HP15_3404	0.81	+0.8
3,577,562	+		HP15_3404	0.82	+1.9
3,577,597	-		HP15_3404	0.84	+0.5
3,577,597	-		HP15_3404	0.84	-0.4
3,577,639	+		HP15_3404	0.87	+0.5
3,577,647	-		HP15_3404	0.88	-1.4
3,577,708	-				-1.4
3,577,708	-				-0.0
3,577,870	+				-0.6
3,577,948	-				+0.3
3,577,960	-				-0.0
3,577,968	+				-0.8
3,578,153	-				-0.3
3,578,160	+				-0.7
3,578,201	-		HP15_3405	0.13	-1.2
3,578,389	-		HP15_3405	0.33	-1.8
3,578,399	-		HP15_3405	0.34	-0.7
3,578,423	+		HP15_3405	0.36	+1.6
3,578,454	-		HP15_3405	0.40	+0.3
3,578,638	+		HP15_3405	0.59	+0.1
3,578,646	-		HP15_3405	0.60	-0.1
3,578,646	-		HP15_3405	0.60	-0.1
3,578,793	+		HP15_3405	0.75	+1.7
3,578,812	+		HP15_3405	0.77	-0.1
3,578,820	-		HP15_3405	0.78	-0.2