Strain Fitness in Marinobacter adhaerens HP15 around HP15_3320
Experiment: monoculture; Experiment A, time point 7
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment A, time point 7 |
---|---|---|---|---|---|
remove | |||||
3,480,964 | + | HP15_3318 | 0.88 | -2.3 | |
3,480,991 | + | HP15_3318 | 0.89 | -2.9 | |
3,481,188 | + | -2.2 | |||
3,481,280 | - | +0.2 | |||
3,481,340 | - | +2.0 | |||
3,481,340 | - | +1.7 | |||
3,481,340 | - | +0.1 | |||
3,481,340 | - | -1.0 | |||
3,481,351 | + | +1.9 | |||
3,481,841 | - | -1.4 | |||
3,481,849 | - | +1.1 | |||
3,483,331 | - | HP15_3321 | 0.10 | -0.6 | |
3,483,406 | + | HP15_3321 | 0.21 | +0.5 | |
3,483,463 | + | HP15_3321 | 0.30 | +0.7 | |
3,483,479 | + | HP15_3321 | 0.32 | -1.6 | |
3,483,480 | - | HP15_3321 | 0.32 | +1.0 | |
3,483,674 | - | HP15_3321 | 0.61 | +1.4 | |
3,483,688 | + | HP15_3321 | 0.63 | +0.2 | |
3,483,787 | + | HP15_3321 | 0.78 | +1.6 | |
3,483,931 | + | +1.3 |
Or see this region's nucleotide sequence