Strain Fitness in Marinobacter adhaerens HP15 around HP15_3319
Experiment: monoculture; Experiment A, time point 7
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment A, time point 7 |
---|---|---|---|---|---|
remove | |||||
3,480,389 | + | HP15_3318 | 0.66 | -2.4 | |
3,480,499 | - | HP15_3318 | 0.70 | +1.9 | |
3,480,501 | - | HP15_3318 | 0.71 | +1.2 | |
3,480,501 | - | HP15_3318 | 0.71 | -0.3 | |
3,480,502 | - | HP15_3318 | 0.71 | -1.7 | |
3,480,506 | + | HP15_3318 | 0.71 | +1.1 | |
3,480,514 | - | HP15_3318 | 0.71 | +1.0 | |
3,480,593 | + | HP15_3318 | 0.74 | +1.0 | |
3,480,593 | + | HP15_3318 | 0.74 | -3.3 | |
3,480,601 | - | HP15_3318 | 0.74 | +0.5 | |
3,480,647 | + | HP15_3318 | 0.76 | +0.3 | |
3,480,793 | - | HP15_3318 | 0.82 | -1.4 | |
3,480,964 | + | HP15_3318 | 0.88 | -2.3 | |
3,480,991 | + | HP15_3318 | 0.89 | -2.9 | |
3,481,188 | + | -2.2 | |||
3,481,280 | - | +0.2 | |||
3,481,340 | - | +2.0 | |||
3,481,340 | - | +1.7 | |||
3,481,340 | - | +0.1 | |||
3,481,340 | - | -1.0 | |||
3,481,351 | + | +1.9 | |||
3,481,841 | - | -1.4 | |||
3,481,849 | - | +1.1 |
Or see this region's nucleotide sequence