Strain Fitness in Marinobacter adhaerens HP15 around HP15_2425
Experiment: monoculture; Experiment A, time point 7
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment A, time point 7 |
---|---|---|---|---|---|
remove | |||||
2,566,288 | + | HP15_2424 | 0.88 | -3.0 | |
2,566,392 | - | -1.1 | |||
2,566,431 | - | -1.4 | |||
2,566,571 | - | -2.3 | |||
2,566,684 | - | HP15_2425 | 0.14 | -1.5 | |
2,566,903 | - | HP15_2425 | 0.64 | -1.1 | |
2,566,988 | - | HP15_2425 | 0.83 | -1.9 | |
2,567,101 | + | +1.0 | |||
2,567,327 | + | -0.6 | |||
2,567,381 | - | HP15_2426 | 0.12 | -1.3 | |
2,567,410 | + | HP15_2426 | 0.16 | +1.7 | |
2,567,428 | - | HP15_2426 | 0.19 | -0.4 | |
2,567,502 | + | HP15_2426 | 0.29 | +1.3 | |
2,567,502 | + | HP15_2426 | 0.29 | +0.4 | |
2,567,510 | - | HP15_2426 | 0.30 | -1.7 | |
2,567,510 | - | HP15_2426 | 0.30 | +0.4 | |
2,567,515 | - | HP15_2426 | 0.30 | -2.1 | |
2,567,696 | + | HP15_2426 | 0.55 | -0.2 |
Or see this region's nucleotide sequence