Strain Fitness in Marinobacter adhaerens HP15 around HP15_1887

Experiment: monoculture; Experiment A, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 7
1,990,981	+		HP15_1886	0.34	-0.3
1,990,981	+		HP15_1886	0.34	+1.3
1,990,989	-		HP15_1886	0.35	-0.0
1,990,989	-		HP15_1886	0.35	-0.1
1,990,989	-		HP15_1886	0.35	+0.8
1,990,991	+		HP15_1886	0.35	+0.1
1,991,048	-		HP15_1886	0.42	+1.7
1,991,185	+		HP15_1886	0.61	+0.3
1,991,301	-		HP15_1886	0.76	-0.6
1,991,325	+		HP15_1886	0.79	+2.9
1,991,331	-		HP15_1886	0.80	+0.3
1,991,403	-		HP15_1886	0.89	-0.2
1,991,429	+				-2.1
1,991,597	+				+1.0
1,991,640	-				+0.9
1,991,643	+				-1.8
1,991,761	-				+0.9
1,991,761	-				+0.6
1,991,799	+				-0.1
1,991,804	+		HP15_1887	0.10	+1.3
1,991,846	-		HP15_1887	0.15	-1.3
1,991,907	+		HP15_1887	0.23	-0.1
1,991,955	+		HP15_1887	0.29	-0.9
1,991,986	+		HP15_1887	0.33	-0.8
1,991,992	+		HP15_1887	0.33	+0.2
1,992,028	-		HP15_1887	0.38	+0.1
1,992,036	+		HP15_1887	0.39	+1.0
1,992,037	+		HP15_1887	0.39	+2.4
1,992,101	+		HP15_1887	0.47	-0.4
1,992,114	+		HP15_1887	0.49	-0.4
1,992,129	-		HP15_1887	0.51	-0.7
1,992,143	-		HP15_1887	0.52	+0.8
1,992,165	+		HP15_1887	0.55	-1.2
1,992,173	-		HP15_1887	0.56	+1.2
1,992,244	+		HP15_1887	0.65	-1.2
1,992,249	+		HP15_1887	0.66	+0.7
1,992,254	-		HP15_1887	0.66	+0.5
1,992,470	+				-0.1
1,992,498	+				-0.3
1,992,501	-				+0.4
1,992,571	-				-0.5
1,992,626	+		HP15_1888	0.13	+0.8
1,992,649	-		HP15_1888	0.16	-2.7
1,992,710	+		HP15_1888	0.23	+0.5
1,992,710	+		HP15_1888	0.23	-0.6
1,992,716	-		HP15_1888	0.24	-0.6
1,992,717	-		HP15_1888	0.24	+0.1
1,992,761	+		HP15_1888	0.29	+0.5
1,992,805	-		HP15_1888	0.35	-0.7
1,992,864	+		HP15_1888	0.42	-3.2
1,992,897	+		HP15_1888	0.46	-1.0
1,992,905	-		HP15_1888	0.47	+0.5
1,992,943	+		HP15_1888	0.52	+0.0
1,992,981	-		HP15_1888	0.56	-1.1
1,993,054	+		HP15_1888	0.65	+0.7
1,993,139	+		HP15_1888	0.76	-0.8
1,993,173	-		HP15_1888	0.80	-1.2
1,993,191	+		HP15_1888	0.82	-1.2
1,993,418	-				+1.1
1,993,455	+		HP15_1889	0.13	+0.8