Strain Fitness in Marinobacter adhaerens HP15 around HP15_1831
Experiment: monoculture; Experiment A, time point 7
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment A, time point 7 |
---|---|---|---|---|---|
remove | |||||
1,929,510 | - | HP15_1830 | 0.82 | +1.7 | |
1,929,572 | - | HP15_1830 | 0.84 | -1.0 | |
1,929,645 | + | HP15_1830 | 0.87 | -0.0 | |
1,929,645 | - | HP15_1830 | 0.87 | +1.9 | |
1,929,645 | - | HP15_1830 | 0.87 | -2.1 | |
1,929,770 | + | +0.8 | |||
1,929,786 | - | -0.1 | |||
1,930,003 | + | -0.3 | |||
1,930,003 | + | +0.9 | |||
1,930,003 | + | +1.4 | |||
1,930,005 | + | +0.2 | |||
1,930,240 | + | +0.0 | |||
1,931,635 | + | +0.2 | |||
1,931,641 | - | -2.9 | |||
1,931,902 | - | HP15_1832 | 0.24 | -2.1 | |
1,932,029 | - | HP15_1832 | 0.36 | -0.4 | |
1,932,062 | + | HP15_1832 | 0.39 | -2.5 | |
1,932,225 | + | HP15_1832 | 0.54 | -1.6 | |
1,932,233 | - | HP15_1832 | 0.54 | -0.7 | |
1,932,234 | + | HP15_1832 | 0.54 | -2.0 | |
1,932,386 | + | HP15_1832 | 0.68 | -0.5 | |
1,932,421 | - | HP15_1832 | 0.72 | -3.9 | |
1,932,449 | - | HP15_1832 | 0.74 | +0.2 |
Or see this region's nucleotide sequence