Strain Fitness in Marinobacter adhaerens HP15 around HP15_1814
Experiment: monoculture; Experiment A, time point 7
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment A, time point 7 |
---|---|---|---|---|---|
remove | |||||
1,907,831 | - | HP15_1813 | 0.64 | +0.2 | |
1,907,831 | - | HP15_1813 | 0.64 | -0.8 | |
1,908,095 | + | HP15_1813 | 0.79 | +1.6 | |
1,908,101 | - | HP15_1813 | 0.79 | +0.5 | |
1,908,103 | - | HP15_1813 | 0.79 | +1.6 | |
1,908,103 | - | HP15_1813 | 0.79 | +2.1 | |
1,908,306 | + | -1.0 | |||
1,908,335 | + | -0.7 | |||
1,908,343 | - | -1.8 | |||
1,908,422 | + | +0.3 | |||
1,908,556 | + | +0.6 | |||
1,908,615 | - | -1.4 | |||
1,908,725 | + | -1.4 | |||
1,908,740 | + | +2.1 | |||
1,909,222 | - | HP15_1814 | 0.50 | -1.9 | |
1,909,295 | + | HP15_1814 | 0.57 | -1.4 | |
1,909,462 | - | HP15_1814 | 0.72 | -1.5 | |
1,909,557 | - | HP15_1814 | 0.81 | +1.2 | |
1,909,817 | + | -2.4 | |||
1,909,907 | + | HP15_1815 | 0.14 | -3.6 | |
1,910,346 | + | HP15_1815 | 0.65 | -2.2 | |
1,910,350 | - | HP15_1815 | 0.65 | -3.4 | |
1,910,499 | + | HP15_1815 | 0.83 | -5.8 | |
1,910,571 | + | -3.1 |
Or see this region's nucleotide sequence