Strain Fitness in Marinobacter adhaerens HP15 around HP15_1415

Experiment: monoculture; Experiment A, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 7
1,493,954	-		HP15_1414	0.14	-0.0
1,493,973	-		HP15_1414	0.15	+0.2
1,494,072	+		HP15_1414	0.24	+0.9
1,494,162	-		HP15_1414	0.32	+0.4
1,494,331	+		HP15_1414	0.48	+0.7
1,494,353	+		HP15_1414	0.50	-0.9
1,494,361	-		HP15_1414	0.50	-0.8
1,494,489	+		HP15_1414	0.62	-0.1
1,494,497	-		HP15_1414	0.63	+0.1
1,494,499	+		HP15_1414	0.63	+0.0
1,494,502	-		HP15_1414	0.63	+0.5
1,494,505	+		HP15_1414	0.63	+0.6
1,494,583	-		HP15_1414	0.70	+0.2
1,494,656	+		HP15_1414	0.77	-0.4
1,494,664	-		HP15_1414	0.78	-0.8
1,494,730	-		HP15_1414	0.84	-0.2
1,494,778	+		HP15_1414	0.88	+1.9
1,494,778	+		HP15_1414	0.88	-0.6
1,494,786	-		HP15_1414	0.89	-0.7
1,494,786	-		HP15_1414	0.89	+1.2
1,494,786	-		HP15_1414	0.89	+0.6
1,494,786	-		HP15_1414	0.89	+1.3
1,494,786	-		HP15_1414	0.89	-0.0
1,494,786	-		HP15_1414	0.89	+1.8
1,494,786	-		HP15_1414	0.89	-0.1
1,494,786	-		HP15_1414	0.89	+0.1
1,494,877	+				+0.0
1,494,907	-				-0.8
1,495,058	+				-0.2
1,495,187	+		HP15_1415	0.10	+0.5
1,495,195	-		HP15_1415	0.10	-0.4
1,495,237	-		HP15_1415	0.12	+1.8
1,495,237	-		HP15_1415	0.12	-3.5
1,495,315	-		HP15_1415	0.15	-2.9
1,495,484	-		HP15_1415	0.21	-1.6
1,495,524	-		HP15_1415	0.23	-0.6
1,495,529	-		HP15_1415	0.23	-1.0
1,495,538	+		HP15_1415	0.23	+0.8
1,495,556	-		HP15_1415	0.24	-0.3
1,495,560	+		HP15_1415	0.24	+1.3
1,495,566	-		HP15_1415	0.25	+0.1
1,495,679	-		HP15_1415	0.29	+0.9
1,495,679	-		HP15_1415	0.29	-0.1
1,495,727	-		HP15_1415	0.31	+0.1
1,495,842	-		HP15_1415	0.35	+0.4
1,495,945	+		HP15_1415	0.39	+0.2
1,496,017	-		HP15_1415	0.42	-0.5
1,496,038	-		HP15_1415	0.42	-1.4
1,496,145	-		HP15_1415	0.47	+1.4
1,496,180	-		HP15_1415	0.48	+1.7
1,496,312	-		HP15_1415	0.53	-0.2
1,496,604	-		HP15_1415	0.64	+1.3
1,496,611	-		HP15_1415	0.64	-0.2
1,496,634	+		HP15_1415	0.65	-1.4
1,496,635	-		HP15_1415	0.65	-0.8
1,496,667	+		HP15_1415	0.66	-0.2
1,496,667	+		HP15_1415	0.66	-1.5
1,496,675	-		HP15_1415	0.67	+0.8
1,496,713	+		HP15_1415	0.68	-0.9
1,496,713	+		HP15_1415	0.68	+0.4
1,496,713	+		HP15_1415	0.68	+0.5
1,496,713	+		HP15_1415	0.68	-0.0
1,496,713	+		HP15_1415	0.68	+0.0
1,496,721	-		HP15_1415	0.68	-1.1
1,496,721	-		HP15_1415	0.68	+0.3
1,496,731	-		HP15_1415	0.69	-0.7
1,496,859	+		HP15_1415	0.74	+0.7
1,496,896	-		HP15_1415	0.75	-0.2
1,497,017	+		HP15_1415	0.80	+0.9
1,497,056	-		HP15_1415	0.81	+1.6
1,497,082	-		HP15_1415	0.82	-0.2
1,497,161	+		HP15_1415	0.85	+1.6
1,497,161	-		HP15_1415	0.85	-0.5
1,497,168	+		HP15_1415	0.85	+0.5
1,497,242	-		HP15_1415	0.88	+1.4
1,497,242	-		HP15_1415	0.88	+1.7
1,497,294	+				-1.6
1,497,299	+				+0.1
1,497,304	+				+0.6
1,497,328	+				-1.4
1,497,414	+				-0.6
1,497,419	+				+0.6
1,497,422	-				+1.0
1,497,422	-				-0.2
1,497,427	-				+3.0
1,497,495	-				+0.4
1,497,521	+				-1.0
1,497,541	-				+0.4
1,497,567	+				-0.1
1,497,899	+				+0.0
1,498,029	+				-0.5
1,498,131	+				+1.0
1,498,316	+		HP15_1416	0.11	-0.2
1,498,374	+		HP15_1416	0.16	-1.2
1,498,382	-		HP15_1416	0.16	+0.9
1,498,463	+		HP15_1416	0.23	+0.5