Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23535 and AZOBR_RS23540 are separated by 152 nucleotides AZOBR_RS23540 and AZOBR_RS23545 are separated by 14 nucleotides
AZOBR_RS23535: AZOBR_RS23535 - exodeoxyribonuclease V, at 308,580 to 309,776
_RS23535
AZOBR_RS23540: AZOBR_RS23540 - tetrathionate reductase subunit A, at 309,929 to 313,036
_RS23540
AZOBR_RS23545: AZOBR_RS23545 - tetrathionate reductase, at 313,051 to 314,184
_RS23545
Position (kb) 309
310
311
312
313
314 Strain fitness (log2 ratio) -1
0
1
2
3 at 309.459 kb on - strand, within AZOBR_RS23535 at 309.522 kb on + strand, within AZOBR_RS23535 at 309.523 kb on - strand, within AZOBR_RS23535 at 309.682 kb on - strand at 309.682 kb on - strand at 310.333 kb on - strand, within AZOBR_RS23540 at 310.503 kb on + strand, within AZOBR_RS23540 at 310.744 kb on - strand, within AZOBR_RS23540 at 310.998 kb on + strand, within AZOBR_RS23540 at 311.188 kb on - strand, within AZOBR_RS23540 at 311.238 kb on + strand, within AZOBR_RS23540 at 311.324 kb on + strand, within AZOBR_RS23540 at 311.324 kb on + strand, within AZOBR_RS23540 at 311.352 kb on + strand, within AZOBR_RS23540 at 311.353 kb on - strand, within AZOBR_RS23540 at 311.463 kb on + strand, within AZOBR_RS23540 at 311.925 kb on + strand, within AZOBR_RS23540 at 311.925 kb on + strand, within AZOBR_RS23540 at 311.925 kb on + strand, within AZOBR_RS23540 at 311.925 kb on + strand, within AZOBR_RS23540 at 311.925 kb on + strand, within AZOBR_RS23540 at 311.926 kb on - strand, within AZOBR_RS23540 at 311.926 kb on - strand, within AZOBR_RS23540 at 311.926 kb on - strand, within AZOBR_RS23540 at 311.966 kb on + strand, within AZOBR_RS23540 at 311.966 kb on + strand, within AZOBR_RS23540 at 311.966 kb on + strand, within AZOBR_RS23540 at 311.967 kb on - strand, within AZOBR_RS23540 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.267 kb on + strand, within AZOBR_RS23540 at 312.268 kb on - strand, within AZOBR_RS23540 at 312.268 kb on - strand, within AZOBR_RS23540 at 312.723 kb on + strand, within AZOBR_RS23540 at 312.723 kb on + strand, within AZOBR_RS23540 at 312.724 kb on - strand, within AZOBR_RS23540 at 312.938 kb on + strand at 312.939 kb on - strand at 312.939 kb on - strand at 312.939 kb on - strand at 313.220 kb on + strand, within AZOBR_RS23545 at 313.226 kb on + strand, within AZOBR_RS23545 at 313.633 kb on + strand, within AZOBR_RS23545 at 313.634 kb on - strand, within AZOBR_RS23545 at 313.853 kb on + strand, within AZOBR_RS23545 at 313.874 kb on + strand, within AZOBR_RS23545 at 313.875 kb on - strand, within AZOBR_RS23545 at 313.931 kb on + strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM remove 309,459 - AZOBR_RS23535 0.73 -0.2 309,522 + AZOBR_RS23535 0.79 -0.8 309,523 - AZOBR_RS23535 0.79 +0.2 309,682 - -0.4 309,682 - -0.5 310,333 - AZOBR_RS23540 0.13 +0.6 310,503 + AZOBR_RS23540 0.18 -0.1 310,744 - AZOBR_RS23540 0.26 -0.3 310,998 + AZOBR_RS23540 0.34 -0.5 311,188 - AZOBR_RS23540 0.41 -0.3 311,238 + AZOBR_RS23540 0.42 +0.4 311,324 + AZOBR_RS23540 0.45 +1.3 311,324 + AZOBR_RS23540 0.45 -0.1 311,352 + AZOBR_RS23540 0.46 +0.4 311,353 - AZOBR_RS23540 0.46 -0.1 311,463 + AZOBR_RS23540 0.49 +0.9 311,925 + AZOBR_RS23540 0.64 -0.6 311,925 + AZOBR_RS23540 0.64 -1.1 311,925 + AZOBR_RS23540 0.64 +1.5 311,925 + AZOBR_RS23540 0.64 +0.1 311,925 + AZOBR_RS23540 0.64 +0.9 311,926 - AZOBR_RS23540 0.64 +0.4 311,926 - AZOBR_RS23540 0.64 +0.8 311,926 - AZOBR_RS23540 0.64 -0.2 311,966 + AZOBR_RS23540 0.66 +2.9 311,966 + AZOBR_RS23540 0.66 +0.5 311,966 + AZOBR_RS23540 0.66 +0.4 311,967 - AZOBR_RS23540 0.66 +0.2 312,075 + AZOBR_RS23540 0.69 +0.9 312,075 + AZOBR_RS23540 0.69 +0.3 312,075 + AZOBR_RS23540 0.69 +0.6 312,267 + AZOBR_RS23540 0.75 -0.8 312,268 - AZOBR_RS23540 0.75 -0.2 312,268 - AZOBR_RS23540 0.75 -1.7 312,723 + AZOBR_RS23540 0.90 -1.3 312,723 + AZOBR_RS23540 0.90 +1.1 312,724 - AZOBR_RS23540 0.90 +0.5 312,938 + -0.1 312,939 - -0.2 312,939 - +0.1 312,939 - +0.3 313,220 + AZOBR_RS23545 0.15 +0.2 313,226 + AZOBR_RS23545 0.15 +0.9 313,633 + AZOBR_RS23545 0.51 -1.0 313,634 - AZOBR_RS23545 0.51 +0.9 313,853 + AZOBR_RS23545 0.71 +0.1 313,874 + AZOBR_RS23545 0.73 -0.1 313,875 - AZOBR_RS23545 0.73 +0.4 313,931 + AZOBR_RS23545 0.78 -0.2 313,932 - AZOBR_RS23545 0.78 -0.9 313,932 - AZOBR_RS23545 0.78 -0.4 313,932 - AZOBR_RS23545 0.78 +0.3 313,932 - AZOBR_RS23545 0.78 -0.0 313,932 - AZOBR_RS23545 0.78 -0.4 313,932 - AZOBR_RS23545 0.78 +1.0
Or see this region's nucleotide sequence