Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS19425 and AZOBR_RS19430 are separated by 209 nucleotides AZOBR_RS19430 and AZOBR_RS19435 are separated by 12 nucleotides AZOBR_RS19435 and AZOBR_RS19440 are separated by 15 nucleotides AZOBR_RS19440 and AZOBR_RS19445 are separated by 209 nucleotides
AZOBR_RS19425: AZOBR_RS19425 - phosphoglyceromutase, at 1,132,873 to 1,133,634
_RS19425
AZOBR_RS19430: AZOBR_RS19430 - hypothetical protein, at 1,133,844 to 1,134,140
_RS19430
AZOBR_RS19435: AZOBR_RS19435 - hypothetical protein, at 1,134,153 to 1,134,494
_RS19435
AZOBR_RS19440: AZOBR_RS19440 - hypothetical protein, at 1,134,510 to 1,134,707
_RS19440
AZOBR_RS19445: AZOBR_RS19445 - glycogen debranching protein, at 1,134,917 to 1,137,202
_RS19445
Position (kb) 1134
1135 Strain fitness (log2 ratio) -1
0
1 at 1133.367 kb on - strand, within AZOBR_RS19425 at 1133.728 kb on + strand at 1133.728 kb on + strand at 1133.729 kb on - strand at 1133.941 kb on - strand, within AZOBR_RS19430 at 1134.351 kb on - strand, within AZOBR_RS19435 at 1134.691 kb on + strand at 1134.691 kb on + strand at 1134.691 kb on + strand at 1134.691 kb on + strand at 1134.691 kb on + strand at 1134.692 kb on - strand at 1134.692 kb on - strand at 1134.692 kb on - strand at 1134.692 kb on - strand at 1135.410 kb on + strand, within AZOBR_RS19445 at 1135.410 kb on + strand, within AZOBR_RS19445 at 1135.411 kb on - strand, within AZOBR_RS19445 at 1135.411 kb on - strand, within AZOBR_RS19445 at 1135.411 kb on - strand, within AZOBR_RS19445 at 1135.411 kb on - strand, within AZOBR_RS19445 at 1135.411 kb on - strand, within AZOBR_RS19445
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM remove 1,133,367 - AZOBR_RS19425 0.65 +0.6 1,133,728 + -0.3 1,133,728 + -0.2 1,133,729 - -1.2 1,133,941 - AZOBR_RS19430 0.33 -1.5 1,134,351 - AZOBR_RS19435 0.58 +0.3 1,134,691 + -0.8 1,134,691 + -0.3 1,134,691 + -1.2 1,134,691 + -0.1 1,134,691 + +0.0 1,134,692 - -0.8 1,134,692 - -0.9 1,134,692 - +0.1 1,134,692 - +0.0 1,135,410 + AZOBR_RS19445 0.22 +0.1 1,135,410 + AZOBR_RS19445 0.22 -0.2 1,135,411 - AZOBR_RS19445 0.22 +0.3 1,135,411 - AZOBR_RS19445 0.22 -0.1 1,135,411 - AZOBR_RS19445 0.22 +0.0 1,135,411 - AZOBR_RS19445 0.22 -0.2 1,135,411 - AZOBR_RS19445 0.22 +0.1
Or see this region's nucleotide sequence