Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS18510

Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS18505 and AZOBR_RS18510 are separated by 965 nucleotides AZOBR_RS18505: AZOBR_RS18505 - hypothetical protein, at 920,822 to 921,049 _RS18505 AZOBR_RS18510: AZOBR_RS18510 - plasmid replication protein, at 922,015 to 922,944 _RS18510 Position (kb) 922 923Strain fitness (log2 ratio) -1 0 1at 921.036 kb on + strandat 921.036 kb on + strandat 921.036 kb on + strandat 921.036 kb on - strandat 921.037 kb on - strandat 921.037 kb on - strandat 921.037 kb on - strandat 921.069 kb on + strandat 921.070 kb on - strandat 921.070 kb on - strandat 921.159 kb on + strandat 921.159 kb on + strandat 921.159 kb on + strandat 921.160 kb on - strandat 921.160 kb on - strandat 921.160 kb on - strandat 921.160 kb on - strandat 921.160 kb on - strandat 921.160 kb on - strandat 921.160 kb on - strandat 921.196 kb on - strandat 921.196 kb on - strandat 921.196 kb on - strandat 921.196 kb on - strandat 921.273 kb on + strandat 921.273 kb on + strandat 921.273 kb on + strandat 921.273 kb on + strandat 921.274 kb on - strandat 921.274 kb on - strandat 921.276 kb on + strandat 921.277 kb on - strandat 921.277 kb on - strandat 921.277 kb on - strandat 921.277 kb on - strandat 921.327 kb on + strandat 921.327 kb on + strandat 921.328 kb on - strandat 921.328 kb on - strandat 921.328 kb on - strandat 921.328 kb on - strandat 921.328 kb on - strandat 921.328 kb on - strandat 921.330 kb on + strandat 921.330 kb on + strandat 921.331 kb on - strandat 921.331 kb on - strandat 921.390 kb on + strandat 921.391 kb on - strandat 921.391 kb on - strandat 921.459 kb on + strandat 921.460 kb on - strandat 921.460 kb on - strandat 921.460 kb on - strandat 921.531 kb on + strandat 921.531 kb on + strandat 921.532 kb on - strandat 921.636 kb on + strandat 921.637 kb on - strandat 921.637 kb on - strandat 921.637 kb on - strandat 921.637 kb on - strandat 921.637 kb on - strandat 921.688 kb on - strandat 921.748 kb on - strandat 921.748 kb on - strandat 921.748 kb on - strandat 921.748 kb on - strandat 921.820 kb on - strandat 923.910 kb on + strandat 923.911 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM
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921,036 + -0.5
921,036 + -0.4
921,036 + -0.1
921,036 - -0.1
921,037 - +0.1
921,037 - +0.3
921,037 - -0.1
921,069 + -0.9
921,070 - +0.3
921,070 - -0.9
921,159 + -1.5
921,159 + -0.2
921,159 + +1.4
921,160 - -0.3
921,160 - -0.5
921,160 - +0.5
921,160 - +0.3
921,160 - -0.7
921,160 - -0.5
921,160 - +0.2
921,196 - -0.5
921,196 - +0.3
921,196 - -1.3
921,196 - +0.4
921,273 + -0.6
921,273 + +1.0
921,273 + -0.8
921,273 + -0.0
921,274 - +0.1
921,274 - +0.5
921,276 + -0.0
921,277 - -0.6
921,277 - -0.3
921,277 - +0.4
921,277 - +0.6
921,327 + -1.0
921,327 + -1.1
921,328 - +0.7
921,328 - -0.2
921,328 - -0.1
921,328 - -0.1
921,328 - +0.2
921,328 - -0.0
921,330 + +0.6
921,330 + +0.2
921,331 - +0.2
921,331 - +0.1
921,390 + -1.0
921,391 - +0.4
921,391 - -0.2
921,459 + -1.0
921,460 - +0.6
921,460 - +0.8
921,460 - +0.9
921,531 + +0.6
921,531 + -0.1
921,532 - -0.2
921,636 + +0.6
921,637 - -1.7
921,637 - +0.8
921,637 - +0.3
921,637 - -1.3
921,637 - -0.0
921,688 - -0.0
921,748 - -0.9
921,748 - +0.4
921,748 - +0.4
921,748 - +1.0
921,820 - +0.1
923,910 + +1.0
923,911 - +0.1

Or see this region's nucleotide sequence