Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS14990 and AZOBR_RS14995 are separated by 209 nucleotides AZOBR_RS14995 and AZOBR_RS15000 are separated by 146 nucleotides AZOBR_RS15000 and AZOBR_RS15005 are separated by 335 nucleotides
AZOBR_RS14990: AZOBR_RS14990 - phasin, at 135,331 to 135,759
_RS14990
AZOBR_RS14995: AZOBR_RS14995 - hypothetical protein, at 135,969 to 136,541
_RS14995
AZOBR_RS15000: AZOBR_RS15000 - membrane protein, at 136,688 to 138,271
_RS15000
AZOBR_RS15005: AZOBR_RS15005 - GTPase HflX, at 138,607 to 139,887
_RS15005
Position (kb) 136
137
138
139 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 135.699 kb on - strand, within AZOBR_RS14990 at 135.699 kb on - strand, within AZOBR_RS14990 at 135.844 kb on + strand at 135.845 kb on - strand at 135.876 kb on + strand at 135.876 kb on + strand at 135.876 kb on + strand at 135.876 kb on + strand at 135.877 kb on - strand at 135.877 kb on - strand at 136.429 kb on + strand, within AZOBR_RS14995 at 136.429 kb on + strand, within AZOBR_RS14995 at 136.430 kb on - strand, within AZOBR_RS14995 at 136.430 kb on - strand, within AZOBR_RS14995 at 136.656 kb on - strand at 136.729 kb on + strand at 136.729 kb on + strand at 136.729 kb on + strand at 136.730 kb on - strand at 136.730 kb on - strand at 136.731 kb on + strand at 136.731 kb on + strand at 136.732 kb on - strand at 136.732 kb on - strand at 136.732 kb on - strand at 136.732 kb on - strand at 136.732 kb on - strand at 136.732 kb on - strand at 136.732 kb on - strand at 136.732 kb on - strand at 136.732 kb on - strand at 136.924 kb on - strand, within AZOBR_RS15000 at 136.932 kb on + strand, within AZOBR_RS15000 at 137.343 kb on + strand, within AZOBR_RS15000 at 137.419 kb on - strand, within AZOBR_RS15000 at 137.886 kb on + strand, within AZOBR_RS15000 at 137.964 kb on + strand, within AZOBR_RS15000 at 137.964 kb on + strand, within AZOBR_RS15000 at 137.964 kb on + strand, within AZOBR_RS15000 at 138.043 kb on - strand, within AZOBR_RS15000 at 138.066 kb on + strand, within AZOBR_RS15000 at 138.066 kb on + strand, within AZOBR_RS15000 at 138.067 kb on - strand, within AZOBR_RS15000 at 138.067 kb on - strand, within AZOBR_RS15000 at 138.067 kb on - strand, within AZOBR_RS15000 at 138.073 kb on - strand, within AZOBR_RS15000 at 138.129 kb on + strand at 138.165 kb on + strand at 138.343 kb on + strand at 138.343 kb on + strand at 138.343 kb on + strand at 138.343 kb on + strand at 138.343 kb on + strand at 138.344 kb on - strand at 138.344 kb on - strand at 139.198 kb on + strand, within AZOBR_RS15005
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM remove 135,699 - AZOBR_RS14990 0.86 +0.2 135,699 - AZOBR_RS14990 0.86 -0.2 135,844 + -0.3 135,845 - -0.4 135,876 + +0.1 135,876 + -0.2 135,876 + -0.1 135,876 + -0.3 135,877 - -0.1 135,877 - +0.6 136,429 + AZOBR_RS14995 0.80 -0.1 136,429 + AZOBR_RS14995 0.80 +0.4 136,430 - AZOBR_RS14995 0.80 -0.5 136,430 - AZOBR_RS14995 0.80 +0.2 136,656 - -1.2 136,729 + -0.7 136,729 + +0.9 136,729 + -1.4 136,730 - +0.7 136,730 - +0.1 136,731 + -0.1 136,731 + -0.4 136,732 - -0.3 136,732 - -0.0 136,732 - -1.0 136,732 - -3.5 136,732 - -0.4 136,732 - +0.9 136,732 - -0.1 136,732 - -0.9 136,732 - -1.4 136,924 - AZOBR_RS15000 0.15 -1.3 136,932 + AZOBR_RS15000 0.15 -0.2 137,343 + AZOBR_RS15000 0.41 -1.3 137,419 - AZOBR_RS15000 0.46 -0.6 137,886 + AZOBR_RS15000 0.76 -1.1 137,964 + AZOBR_RS15000 0.81 +0.3 137,964 + AZOBR_RS15000 0.81 -1.9 137,964 + AZOBR_RS15000 0.81 -0.5 138,043 - AZOBR_RS15000 0.86 +0.7 138,066 + AZOBR_RS15000 0.87 -1.5 138,066 + AZOBR_RS15000 0.87 -0.7 138,067 - AZOBR_RS15000 0.87 -0.3 138,067 - AZOBR_RS15000 0.87 -0.5 138,067 - AZOBR_RS15000 0.87 -1.2 138,073 - AZOBR_RS15000 0.87 -2.4 138,129 + -0.7 138,165 + -0.7 138,343 + +1.2 138,343 + +1.0 138,343 + +0.3 138,343 + +0.3 138,343 + +0.1 138,344 - -0.6 138,344 - +1.5 139,198 + AZOBR_RS15005 0.46 -0.5
Or see this region's nucleotide sequence