Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01890 and AZOBR_RS01895 are separated by 157 nucleotides AZOBR_RS01895 and AZOBR_RS01900 are separated by 120 nucleotides AZOBR_RS01900 and AZOBR_RS01905 overlap by 4 nucleotides
AZOBR_RS01890: AZOBR_RS01890 - glycosyl transferase, at 385,861 to 386,298
_RS01890
AZOBR_RS01895: AZOBR_RS01895 - transcriptional regulator, at 386,456 to 387,145
_RS01895
AZOBR_RS01900: AZOBR_RS01900 - membrane protein, at 387,266 to 387,706
_RS01900
AZOBR_RS01905: AZOBR_RS01905 - sorbosone dehydrogenase, at 387,703 to 388,983
_RS01905
Position (kb) 387
388 Strain fitness (log2 ratio) -1
0
1 at 386.387 kb on + strand at 386.387 kb on + strand at 386.387 kb on + strand at 386.387 kb on + strand at 386.418 kb on + strand at 386.418 kb on + strand at 386.418 kb on + strand at 386.419 kb on - strand at 386.419 kb on - strand at 387.270 kb on + strand at 387.271 kb on - strand at 387.522 kb on - strand, within AZOBR_RS01900 at 387.790 kb on + strand at 387.790 kb on + strand at 387.790 kb on + strand at 388.187 kb on - strand, within AZOBR_RS01905 at 388.187 kb on - strand, within AZOBR_RS01905 at 388.187 kb on - strand, within AZOBR_RS01905 at 388.187 kb on - strand, within AZOBR_RS01905 at 388.282 kb on + strand, within AZOBR_RS01905 at 388.282 kb on + strand, within AZOBR_RS01905 at 388.282 kb on + strand, within AZOBR_RS01905 at 388.283 kb on - strand, within AZOBR_RS01905 at 388.283 kb on - strand, within AZOBR_RS01905 at 388.339 kb on + strand, within AZOBR_RS01905 at 388.339 kb on + strand, within AZOBR_RS01905 at 388.340 kb on - strand, within AZOBR_RS01905 at 388.340 kb on - strand, within AZOBR_RS01905 at 388.447 kb on + strand, within AZOBR_RS01905 at 388.589 kb on - strand, within AZOBR_RS01905 at 388.589 kb on - strand, within AZOBR_RS01905 at 388.601 kb on - strand, within AZOBR_RS01905 at 388.606 kb on + strand, within AZOBR_RS01905 at 388.606 kb on + strand, within AZOBR_RS01905 at 388.607 kb on - strand, within AZOBR_RS01905 at 388.607 kb on - strand, within AZOBR_RS01905 at 388.682 kb on - strand, within AZOBR_RS01905
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM remove 386,387 + +0.1 386,387 + -0.2 386,387 + +0.9 386,387 + -0.9 386,418 + +0.4 386,418 + -1.7 386,418 + -0.9 386,419 - -0.8 386,419 - +0.4 387,270 + +0.5 387,271 - +0.6 387,522 - AZOBR_RS01900 0.58 -1.1 387,790 + -0.3 387,790 + -0.1 387,790 + -0.0 388,187 - AZOBR_RS01905 0.38 +0.0 388,187 - AZOBR_RS01905 0.38 -0.7 388,187 - AZOBR_RS01905 0.38 +1.0 388,187 - AZOBR_RS01905 0.38 +0.1 388,282 + AZOBR_RS01905 0.45 -0.1 388,282 + AZOBR_RS01905 0.45 +0.2 388,282 + AZOBR_RS01905 0.45 -0.5 388,283 - AZOBR_RS01905 0.45 -0.4 388,283 - AZOBR_RS01905 0.45 -0.2 388,339 + AZOBR_RS01905 0.50 -1.0 388,339 + AZOBR_RS01905 0.50 -0.2 388,340 - AZOBR_RS01905 0.50 -1.0 388,340 - AZOBR_RS01905 0.50 +0.3 388,447 + AZOBR_RS01905 0.58 +0.3 388,589 - AZOBR_RS01905 0.69 +1.3 388,589 - AZOBR_RS01905 0.69 +0.1 388,601 - AZOBR_RS01905 0.70 -0.2 388,606 + AZOBR_RS01905 0.70 +0.9 388,606 + AZOBR_RS01905 0.70 +0.3 388,607 - AZOBR_RS01905 0.71 +0.2 388,607 - AZOBR_RS01905 0.71 +0.7 388,682 - AZOBR_RS01905 0.76 -1.1
Or see this region's nucleotide sequence