Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g135

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
137,842	+		HP15_p187g134	0.18	+0.2
137,850	-		HP15_p187g134	0.19	+0.4
137,850	-		HP15_p187g134	0.19	-0.1
137,862	-		HP15_p187g134	0.20	-0.2
137,874	+		HP15_p187g134	0.22	+0.2
137,882	-		HP15_p187g134	0.22	-0.1
137,897	+		HP15_p187g134	0.24	+1.5
137,905	-		HP15_p187g134	0.25	-0.0
137,979	+		HP15_p187g134	0.32	+0.2
137,981	+		HP15_p187g134	0.33	+0.6
137,989	-		HP15_p187g134	0.33	-0.1
137,989	-		HP15_p187g134	0.33	+0.0
137,989	-		HP15_p187g134	0.33	+0.3
137,989	-		HP15_p187g134	0.33	+0.2
137,989	-		HP15_p187g134	0.33	+1.2
138,007	+		HP15_p187g134	0.35	+0.6
138,014	-		HP15_p187g134	0.36	+0.3
138,014	-		HP15_p187g134	0.36	+0.1
138,016	+		HP15_p187g134	0.36	-0.2
138,023	-		HP15_p187g134	0.37	-0.3
138,036	-		HP15_p187g134	0.38	-0.5
138,079	+		HP15_p187g134	0.43	+0.5
138,079	+		HP15_p187g134	0.43	-0.1
138,087	-		HP15_p187g134	0.43	+0.0
138,110	-		HP15_p187g134	0.46	+1.5
138,118	-		HP15_p187g134	0.46	-0.2
138,137	-		HP15_p187g134	0.48	-0.3
138,137	-		HP15_p187g134	0.48	-0.1
138,137	-		HP15_p187g134	0.48	+0.1
138,137	-		HP15_p187g134	0.48	+0.0
138,137	-		HP15_p187g134	0.48	+0.2
138,137	-		HP15_p187g134	0.48	+0.7
138,137	-		HP15_p187g134	0.48	+1.1
138,137	-		HP15_p187g134	0.48	-1.1
138,145	-		HP15_p187g134	0.49	-0.2
138,197	+		HP15_p187g134	0.55	-2.1
138,253	+		HP15_p187g134	0.60	+1.5
138,312	+		HP15_p187g134	0.66	-0.7
138,312	+		HP15_p187g134	0.66	+0.1
138,320	-		HP15_p187g134	0.67	-0.3
138,325	-		HP15_p187g134	0.68	-0.0
138,388	-		HP15_p187g134	0.74	+0.5
138,403	-		HP15_p187g134	0.76	-1.0
138,408	-		HP15_p187g134	0.76	+0.0
138,502	-		HP15_p187g134	0.86	-0.3
138,516	-		HP15_p187g134	0.87	-0.4
138,591	+				-0.1
138,605	+				-0.3
138,621	+				-1.5
138,621	+				+1.0
138,629	-				+1.5
138,629	-				+0.1
138,636	+				-1.6
138,663	+				+0.0
138,726	+				+0.0
138,726	+				-0.4
138,726	+				+0.0
138,740	-				+1.0
138,755	-				+0.4
138,763	+				-0.2
138,781	-				-0.1
138,966	-		HP15_p187g135	0.16	-1.0
138,966	-		HP15_p187g135	0.16	-3.2
139,018	-		HP15_p187g135	0.23	+0.4
139,031	+		HP15_p187g135	0.24	+1.2
139,039	-		HP15_p187g135	0.25	-0.4
139,048	-		HP15_p187g135	0.27	-0.0
139,068	+		HP15_p187g135	0.29	-0.6
139,105	+		HP15_p187g135	0.34	-0.1
139,105	+		HP15_p187g135	0.34	-0.4
139,113	-		HP15_p187g135	0.35	+0.6
139,132	+		HP15_p187g135	0.37	+0.6
139,132	+		HP15_p187g135	0.37	+1.4
139,132	+		HP15_p187g135	0.37	-0.6
139,137	+		HP15_p187g135	0.38	+0.2
139,137	+		HP15_p187g135	0.38	-0.7
139,137	+		HP15_p187g135	0.38	-0.6
139,140	-		HP15_p187g135	0.38	-0.5
139,140	-		HP15_p187g135	0.38	-0.1
139,140	-		HP15_p187g135	0.38	-0.9
139,153	+		HP15_p187g135	0.40	-1.5
139,154	+		HP15_p187g135	0.40	+1.3
139,160	+		HP15_p187g135	0.41	+0.8
139,160	+		HP15_p187g135	0.41	-0.3
139,167	+		HP15_p187g135	0.42	+0.2
139,168	-		HP15_p187g135	0.42	-1.3
139,168	-		HP15_p187g135	0.42	-0.5
139,181	+		HP15_p187g135	0.43	+0.5
139,213	+		HP15_p187g135	0.48	-1.1
139,215	+		HP15_p187g135	0.48	-0.4
139,252	+		HP15_p187g135	0.52	-0.5
139,257	+		HP15_p187g135	0.53	-1.9
139,260	-		HP15_p187g135	0.53	+0.3
139,271	+		HP15_p187g135	0.55	+0.3
139,271	+		HP15_p187g135	0.55	+1.1
139,279	-		HP15_p187g135	0.56	-0.4
139,281	-		HP15_p187g135	0.56	+0.4
139,294	+		HP15_p187g135	0.58	-0.9
139,294	+		HP15_p187g135	0.58	-0.2
139,294	+		HP15_p187g135	0.58	-0.4
139,294	+		HP15_p187g135	0.58	-0.7
139,302	-		HP15_p187g135	0.59	+0.1
139,302	-		HP15_p187g135	0.59	+0.3
139,302	-		HP15_p187g135	0.59	+1.5
139,302	-		HP15_p187g135	0.59	-0.3
139,330	-		HP15_p187g135	0.62	+1.0
139,426	+		HP15_p187g135	0.75	+2.4
139,426	+		HP15_p187g135	0.75	-0.7
139,434	-		HP15_p187g135	0.76	-0.9
139,447	+		HP15_p187g135	0.77	+0.5
139,447	+		HP15_p187g135	0.77	-0.4
139,447	+		HP15_p187g135	0.77	+1.4
139,447	+		HP15_p187g135	0.77	-0.0
139,447	+		HP15_p187g135	0.77	+2.4
139,447	+		HP15_p187g135	0.77	-1.0
139,455	-		HP15_p187g135	0.78	-1.0
139,455	-		HP15_p187g135	0.78	-0.2
139,470	+		HP15_p187g135	0.80	-1.0
139,476	-		HP15_p187g135	0.81	+0.8
139,508	+		HP15_p187g135	0.85	-0.1
139,529	-		HP15_p187g135	0.88	-0.4
139,532	+		HP15_p187g135	0.88	-0.5
139,542	+		HP15_p187g135	0.89	-0.2
139,542	+		HP15_p187g135	0.89	-0.1
139,542	+		HP15_p187g135	0.89	-0.1
139,542	+		HP15_p187g135	0.89	-0.8
139,542	+		HP15_p187g135	0.89	-0.2
139,542	+		HP15_p187g135	0.89	+0.8
139,542	+		HP15_p187g135	0.89	-0.6
139,542	+		HP15_p187g135	0.89	-0.5
139,542	+		HP15_p187g135	0.89	+1.2
139,542	+		HP15_p187g135	0.89	+0.0
139,550	-				+1.2
139,550	-				-0.6
139,550	-				-0.2
139,550	-				+0.9
139,550	-				-1.1
139,550	-				-1.0
139,550	-				+1.6
139,552	+				-0.2
139,553	+				-0.4
139,553	+				-2.0
139,566	-				+1.2
139,587	-				+0.2
139,587	-				-0.2
139,587	-				-1.2
139,621	-				-0.1
139,642	-				+1.2
139,667	+		HP15_p187g136	0.26	-0.1
139,679	+		HP15_p187g136	0.36	-0.5
139,742	+		HP15_p187g136	0.88	-0.2
139,747	+				+1.2
139,750	-				-0.0
139,750	-				-0.3
139,752	-				+0.1
139,787	+				+1.4
139,787	+				-1.0
139,795	-				+0.2
139,795	-				+0.2
139,795	-				+0.9
139,799	+				+0.2
139,801	-				-3.1
139,804	+				-1.6
139,807	-				+0.8
139,807	-				-0.7
139,812	-				-0.6
139,812	-				+0.3
139,834	+				+1.6
139,834	+				+0.1
139,834	+				-0.9
139,834	+				-0.0
139,842	-				+0.3
139,842	-				-0.1
139,891	+				-1.0
139,901	-				+0.3
139,916	-				+0.9
139,970	-				+1.4
140,013	-				-0.6
140,067	-				+0.9
140,131	-				-0.5
140,139	-				-0.2
140,189	+				-0.6
140,189	+				+0.9
140,189	+				+0.6
140,189	+				-0.3
140,189	+				-0.1
140,197	-				-1.2
140,197	-				+0.3
140,202	-				+0.1
140,217	-				-0.0
140,311	+				-1.4
140,319	-				+1.5
140,377	-		HP15_p187g137	0.15	+1.0
140,499	-		HP15_p187g137	0.26	-0.8
140,518	-		HP15_p187g137	0.27	-0.8
140,560	+		HP15_p187g137	0.31	-1.8
140,568	-		HP15_p187g137	0.32	-4.0
140,568	-		HP15_p187g137	0.32	-0.3
140,568	-		HP15_p187g137	0.32	-0.2
140,568	-		HP15_p187g137	0.32	+1.6
140,570	+		HP15_p187g137	0.32	+0.7
140,578	-		HP15_p187g137	0.33	+1.4
140,607	+		HP15_p187g137	0.35	-0.3
140,622	+		HP15_p187g137	0.37	-0.2