Strain Fitness in Marinobacter adhaerens HP15 around HP15_3620

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
3,816,257	-		HP15_3619	0.56	-0.7
3,816,267	+		HP15_3619	0.56	-0.1
3,816,267	+		HP15_3619	0.56	-0.2
3,816,275	-		HP15_3619	0.57	-1.0
3,816,292	-		HP15_3619	0.58	+2.1
3,816,316	+		HP15_3619	0.59	-0.9
3,816,316	+		HP15_3619	0.59	-0.4
3,816,412	+		HP15_3619	0.66	-1.1
3,816,415	-		HP15_3619	0.66	-0.6
3,816,477	+		HP15_3619	0.70	-0.5
3,816,553	-		HP15_3619	0.74	+0.0
3,816,575	+		HP15_3619	0.76	-0.9
3,816,688	+		HP15_3619	0.83	-0.2
3,816,855	-				-2.6
3,816,964	+				-1.0
3,817,161	+				+0.1
3,817,229	-				+1.0
3,817,327	+		HP15_3620	0.14	+0.9
3,817,439	-		HP15_3620	0.29	-0.7
3,817,456	-		HP15_3620	0.31	-0.4
3,817,482	-		HP15_3620	0.35	-0.3
3,817,526	-		HP15_3620	0.41	-0.8
3,817,666	-		HP15_3620	0.59	-1.3
3,817,666	-		HP15_3620	0.59	-1.3
3,817,686	-		HP15_3620	0.62	-2.3
3,817,691	-		HP15_3620	0.63	-1.0
3,817,699	+		HP15_3620	0.64	-0.5
3,817,709	+		HP15_3620	0.65	-2.4
3,817,717	-		HP15_3620	0.66	+0.2
3,817,717	-		HP15_3620	0.66	-0.4
3,817,717	-		HP15_3620	0.66	-0.5
3,817,743	-		HP15_3620	0.69	+0.5
3,817,746	-		HP15_3620	0.70	-0.5
3,817,944	+				-0.8
3,817,952	-				+1.3
3,817,969	+				+1.2
3,817,970	+				+0.9
3,818,062	+		HP15_3621	0.23	-0.7
3,818,097	+		HP15_3621	0.30	+0.2
3,818,097	-		HP15_3621	0.30	+2.0
3,818,328	+		HP15_3621	0.78	-0.1
3,818,328	+		HP15_3621	0.78	-0.7
3,818,375	-		HP15_3621	0.88	+1.2
3,818,506	+				+0.2
3,818,506	+				+1.2
3,818,506	+				+1.1
3,818,514	-				+1.1
3,818,533	-				+0.7
3,818,678	+		HP15_3622	0.30	+1.4
3,818,678	+		HP15_3622	0.30	-1.3
3,818,678	+		HP15_3622	0.30	-0.0
3,818,686	-		HP15_3622	0.32	+0.2
3,818,723	+		HP15_3622	0.38	+0.5
3,818,724	+		HP15_3622	0.38	-1.5