Strain Fitness in Marinobacter adhaerens HP15 around HP15_3517

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
3,698,636	+		HP15_3516	0.53	+0.1
3,698,699	-		HP15_3516	0.56	+0.1
3,698,703	-		HP15_3516	0.56	+0.2
3,698,747	+		HP15_3516	0.59	+1.3
3,698,747	+		HP15_3516	0.59	-0.5
3,698,867	+		HP15_3516	0.64	+1.1
3,698,935	-		HP15_3516	0.68	-0.0
3,698,935	-		HP15_3516	0.68	-0.2
3,698,954	-		HP15_3516	0.69	-0.3
3,698,989	+		HP15_3516	0.70	+1.3
3,698,997	-		HP15_3516	0.71	-0.0
3,699,030	+		HP15_3516	0.72	+0.3
3,699,030	+		HP15_3516	0.72	-0.0
3,699,199	+		HP15_3516	0.81	+0.5
3,699,207	-		HP15_3516	0.81	-0.2
3,699,207	-		HP15_3516	0.81	+0.7
3,699,263	-		HP15_3516	0.84	+1.9
3,699,287	-		HP15_3516	0.85	+0.8
3,699,387	-		HP15_3516	0.90	+1.6
3,699,522	+				-0.4
3,699,563	+				-0.4
3,699,669	-				-1.1
3,699,754	-		HP15_3517	0.15	+0.6
3,699,827	-		HP15_3517	0.23	+1.4
3,700,001	-		HP15_3517	0.42	-0.1
3,700,033	+		HP15_3517	0.46	+0.3
3,700,041	-		HP15_3517	0.46	+1.0
3,700,041	-		HP15_3517	0.46	-0.2
3,700,041	-		HP15_3517	0.46	+0.7
3,700,041	-		HP15_3517	0.46	+0.7
3,700,171	+		HP15_3517	0.61	+0.0
3,700,230	-		HP15_3517	0.67	-0.3
3,700,257	+		HP15_3517	0.70	+1.7
3,700,288	-		HP15_3517	0.74	+1.6
3,700,418	+		HP15_3517	0.88	+1.1
3,700,451	+				+1.1
3,700,465	-				-0.2
3,700,492	-				-0.6
3,700,531	+				+0.5
3,700,590	-				-0.9
3,700,602	+				-0.3
3,700,604	-				+0.2
3,700,606	-				-1.2
3,700,613	+				+0.5
3,700,698	+				+0.3
3,700,718	+				-0.2
3,700,726	-				-0.2
3,700,769	+				+0.6
3,700,893	+				+0.3
3,700,902	+				-0.1
3,700,910	-				-0.1
3,700,910	-				+0.5
3,700,932	+				+0.2
3,700,950	-				+1.5
3,700,952	+				+1.2
3,701,028	-				+1.2
3,701,172	+				+0.3
3,701,243	-				+0.1
3,701,377	+		HP15_3518	0.11	+1.4
3,701,382	+		HP15_3518	0.11	+0.5
3,701,382	+		HP15_3518	0.11	-0.5
3,701,389	+		HP15_3518	0.11	+0.3