Strain Fitness in Marinobacter adhaerens HP15 around HP15_3293

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
3,450,024	+		HP15_3291	0.77	-2.2
3,450,024	-		HP15_3291	0.77	-4.3
3,450,032	-		HP15_3291	0.78	-4.0
3,450,223	-				-0.1
3,450,267	-				+0.1
3,450,321	+				+0.5
3,450,321	+				-0.0
3,450,321	-				+0.1
3,450,379	-				-0.1
3,450,567	+		HP15_3292	0.33	+0.9
3,450,621	+		HP15_3292	0.42	-0.9
3,450,648	-		HP15_3292	0.47	+1.4
3,450,704	+		HP15_3292	0.56	-0.2
3,450,736	+		HP15_3292	0.61	+0.5
3,450,814	+		HP15_3292	0.74	-1.4
3,450,843	+		HP15_3292	0.79	+0.9
3,450,861	+		HP15_3292	0.82	+1.2
3,450,914	-				-0.3
3,450,990	-				+1.4
3,451,016	-				+1.6
3,451,016	-				-1.6
3,451,016	-				+0.1
3,451,021	-				+0.6
3,451,021	-				-0.3
3,451,026	-				-0.1
3,451,077	-		HP15_3293	0.11	+0.1
3,451,089	+		HP15_3293	0.13	-0.1
3,451,147	+		HP15_3293	0.22	-0.2
3,451,157	+		HP15_3293	0.24	+1.4
3,451,158	+		HP15_3293	0.24	+1.4
3,451,165	-		HP15_3293	0.25	-0.6
3,451,305	+		HP15_3293	0.48	-0.0
3,451,383	-		HP15_3293	0.60	+1.3
3,451,397	-		HP15_3293	0.63	+1.1
3,451,507	+		HP15_3293	0.80	+1.9
3,451,533	-		HP15_3293	0.85	+2.2
3,451,659	-				-0.6
3,451,702	+				-0.3
3,451,837	+		HP15_3294	0.16	-1.4
3,451,881	+		HP15_3294	0.22	-1.5
3,451,984	+		HP15_3294	0.36	-0.9
3,452,113	-		HP15_3294	0.54	-1.2
3,452,140	-		HP15_3294	0.57	-3.2
3,452,162	-		HP15_3294	0.60	+1.0
3,452,167	-		HP15_3294	0.61	+0.5
3,452,205	-		HP15_3294	0.66	-1.3
3,452,249	+		HP15_3294	0.72	+2.0
3,452,249	-		HP15_3294	0.72	-0.3
3,452,277	-		HP15_3294	0.76	-1.6
3,452,294	+		HP15_3294	0.78	-1.0
3,452,333	-		HP15_3294	0.84	+0.8
3,452,432	-				+1.1
3,452,433	-				-1.5
3,452,441	-				+0.6
3,452,485	+				+1.0
3,452,620	-		HP15_3295	0.11	+1.1
3,452,620	-		HP15_3295	0.11	-0.5
3,452,620	-		HP15_3295	0.11	-0.2