Strain Fitness in Marinobacter adhaerens HP15 around HP15_3208

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
3,358,926	+		HP15_3206	0.49	-3.0
3,358,934	-		HP15_3206	0.50	+1.5
3,358,934	-		HP15_3206	0.50	-2.2
3,358,946	-		HP15_3206	0.52	-2.2
3,359,028	-		HP15_3206	0.65	-1.7
3,359,075	+		HP15_3206	0.73	-4.0
3,359,078	-		HP15_3206	0.73	-0.5
3,359,134	+		HP15_3206	0.82	-1.6
3,359,303	-				-1.2
3,359,404	-		HP15_3207	0.22	-2.6
3,359,483	+		HP15_3207	0.34	-0.0
3,359,483	+		HP15_3207	0.34	-3.0
3,359,483	+		HP15_3207	0.34	+0.1
3,359,554	+		HP15_3207	0.44	-0.3
3,359,554	+		HP15_3207	0.44	-1.7
3,359,562	-		HP15_3207	0.46	-0.2
3,359,583	-		HP15_3207	0.49	-1.0
3,359,583	-		HP15_3207	0.49	-3.2
3,359,621	+		HP15_3207	0.55	+0.7
3,359,629	-		HP15_3207	0.56	-1.9
3,359,645	+		HP15_3207	0.58	-0.7
3,359,653	-		HP15_3207	0.59	+0.4
3,359,689	+		HP15_3207	0.65	-3.9
3,359,697	-		HP15_3207	0.66	-1.7
3,359,844	+		HP15_3207	0.88	-1.9
3,359,901	+				-0.8
3,359,950	+				-0.5
3,359,955	+				-2.2
3,359,986	+				-0.1
3,359,989	-				-1.6
3,360,005	-				-2.8
3,360,030	+				-1.1
3,360,045	-				-3.1
3,360,067	-		HP15_3208	0.12	-2.6
3,360,081	+		HP15_3208	0.13	-2.0
3,360,081	+		HP15_3208	0.13	-3.6
3,360,081	+		HP15_3208	0.13	-0.8
3,360,089	-		HP15_3208	0.13	-1.7
3,360,127	+		HP15_3208	0.16	-2.4
3,360,135	-		HP15_3208	0.17	-1.2
3,360,135	-		HP15_3208	0.17	-4.3
3,360,135	-		HP15_3208	0.17	-2.5
3,360,135	-		HP15_3208	0.17	-2.1
3,360,137	+		HP15_3208	0.17	-1.7
3,360,214	-		HP15_3208	0.23	-2.3
3,360,267	+		HP15_3208	0.27	-1.6
3,360,303	+		HP15_3208	0.30	-0.8
3,360,303	+		HP15_3208	0.30	-2.2
3,360,323	-		HP15_3208	0.32	-0.5
3,360,324	-		HP15_3208	0.32	-3.6
3,360,333	-		HP15_3208	0.33	-0.8
3,360,333	-		HP15_3208	0.33	-2.2
3,360,362	+		HP15_3208	0.35	-0.1
3,360,370	-		HP15_3208	0.35	-1.3
3,360,421	+		HP15_3208	0.39	-1.2
3,360,425	-		HP15_3208	0.40	-0.5
3,360,511	+		HP15_3208	0.47	-2.0
3,360,529	-		HP15_3208	0.48	-3.1
3,360,682	-		HP15_3208	0.60	-0.5
3,360,794	+		HP15_3208	0.69	-1.8
3,360,802	-		HP15_3208	0.69	-1.7
3,360,866	-		HP15_3208	0.74	-1.4
3,360,902	+		HP15_3208	0.77	-1.3
3,360,953	+		HP15_3208	0.81	-1.2
3,360,962	-		HP15_3208	0.82	+0.5
3,361,002	+		HP15_3208	0.85	-1.2
3,361,123	+				+0.7
3,361,179	+				-0.4
3,361,184	+				-0.3
3,361,294	+				+0.9
3,361,312	-				+2.9
3,361,478	+		HP15_3209	0.88	+0.0
3,361,486	+				-0.0
3,361,486	-				-0.2
3,361,486	-				-1.0
3,361,493	-				-0.1
3,361,510	+				-2.0
3,361,604	+		HP15_3210	0.34	-1.9
3,361,780	-				-1.0
3,361,833	+				+0.1
3,361,882	-				-0.5
3,361,882	-				-1.0
3,361,912	+				-2.6
3,361,912	+				-0.1
3,361,935	-				+0.6
3,362,010	+				-1.2
3,362,093	-		HP15_3211	0.14	-1.2