Strain Fitness in Marinobacter adhaerens HP15 around HP15_1239

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
1,289,508	-		HP15_1238	0.53	-1.9
1,289,508	-		HP15_1238	0.53	-0.4
1,289,553	+		HP15_1238	0.56	-0.6
1,289,580	-		HP15_1238	0.58	-0.8
1,289,672	+		HP15_1238	0.64	+0.9
1,289,672	+		HP15_1238	0.64	-1.1
1,289,738	-		HP15_1238	0.69	-1.0
1,289,740	-		HP15_1238	0.69	-2.0
1,289,796	-		HP15_1238	0.72	-2.0
1,289,796	-		HP15_1238	0.72	+1.8
1,289,877	+		HP15_1238	0.78	-0.5
1,289,880	-		HP15_1238	0.78	+1.5
1,289,972	+		HP15_1238	0.84	+1.5
1,289,972	+		HP15_1238	0.84	+0.4
1,289,980	-		HP15_1238	0.84	+0.0
1,290,112	+				-0.7
1,290,112	+				-0.2
1,290,112	+				-0.7
1,290,112	+				-1.1
1,290,120	-				-0.0
1,290,120	-				-0.8
1,290,120	-				+2.6
1,290,120	-				+1.5
1,290,120	-				-0.6
1,290,120	-				-0.4
1,290,151	-				+1.4
1,290,261	-				+0.9
1,290,268	+				-1.5
1,290,280	-				-0.0
1,290,285	-				-0.2
1,290,315	-				+1.1
1,290,336	+				-1.2
1,290,403	+				-0.4
1,290,416	-				-3.0
1,294,716	+				-0.1
1,294,762	-				-0.9
1,294,768	+				+0.0
1,294,837	-				+0.7
1,295,078	-		HP15_1240	0.85	+1.0
1,295,090	-		HP15_1240	0.89	-0.7
1,295,197	+		HP15_1241	0.11	+0.0
1,295,323	+		HP15_1241	0.34	+0.1
1,295,323	+		HP15_1241	0.34	-0.5
1,295,363	-		HP15_1241	0.41	-0.1