Strain Fitness in Marinobacter adhaerens HP15 around HP15_3350

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
3,512,384	+		HP15_3349	0.24	+0.3
3,512,408	-		HP15_3349	0.26	+0.6
3,512,408	-		HP15_3349	0.26	+0.4
3,512,408	-		HP15_3349	0.26	+0.2
3,512,463	+		HP15_3349	0.30	+0.7
3,512,507	-		HP15_3349	0.34	+0.5
3,512,596	+		HP15_3349	0.42	+0.3
3,512,604	-		HP15_3349	0.43	-0.4
3,512,604	-		HP15_3349	0.43	-2.6
3,512,651	+		HP15_3349	0.47	+0.0
3,512,651	-		HP15_3349	0.47	-0.7
3,512,699	-		HP15_3349	0.51	+0.3
3,512,703	+		HP15_3349	0.51	-0.7
3,512,706	+		HP15_3349	0.52	-0.5
3,512,965	-		HP15_3349	0.74	+0.6
3,513,062	+		HP15_3349	0.82	-0.7
3,513,148	-		HP15_3349	0.90	-0.3
3,513,172	-				-0.0
3,513,221	+				-2.1
3,513,251	+				-0.6
3,513,256	+				+0.9
3,513,278	+				-0.2
3,513,374	+		HP15_3350	0.30	-1.0
3,513,374	+		HP15_3350	0.30	-0.2
3,513,424	-		HP15_3350	0.60	-1.0
3,513,470	+		HP15_3350	0.87	-1.6
3,513,478	-				-1.4
3,513,577	-				-0.4
3,513,594	+				-2.2
3,513,603	-				-0.5
3,513,603	-				-0.9
3,513,642	+				-0.7
3,513,694	+				-0.7
3,513,702	-				-0.6
3,513,711	+				-0.2
3,513,719	-				-0.9
3,513,744	+				-0.1
3,513,785	+				-0.8
3,513,791	+				-1.7
3,514,096	-		HP15_3351	0.61	-1.9
3,514,098	-		HP15_3351	0.61	-4.3
3,514,232	-		HP15_3351	0.85	-2.7
3,514,257	+		HP15_3351	0.90	-1.3
3,514,353	-		HP15_3352	0.10	-2.2
3,514,382	+		HP15_3352	0.16	-4.4
3,514,385	-		HP15_3352	0.16	-7.1
3,514,400	-		HP15_3352	0.19	-7.8