Strain Fitness in Marinobacter adhaerens HP15 around HP15_3177

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
3,329,686	+				-1.0
3,329,688	+				+0.5
3,329,880	+		HP15_3176	0.18	-0.8
3,329,888	-		HP15_3176	0.19	-0.4
3,329,940	+		HP15_3176	0.24	+1.4
3,330,021	-		HP15_3176	0.33	-0.8
3,330,023	+		HP15_3176	0.34	+0.5
3,330,031	-		HP15_3176	0.35	-0.8
3,330,031	-		HP15_3176	0.35	-1.7
3,330,031	-		HP15_3176	0.35	+0.1
3,330,063	-		HP15_3176	0.38	+1.4
3,330,079	+		HP15_3176	0.40	+0.3
3,330,079	+		HP15_3176	0.40	-1.1
3,330,097	+		HP15_3176	0.42	-0.4
3,330,110	-		HP15_3176	0.43	-1.5
3,330,110	-		HP15_3176	0.43	-0.4
3,330,110	-		HP15_3176	0.43	+0.1
3,330,121	+		HP15_3176	0.45	-0.7
3,330,204	-		HP15_3176	0.54	+0.2
3,330,232	+		HP15_3176	0.57	+0.1
3,330,240	-		HP15_3176	0.58	-0.6
3,330,243	+		HP15_3176	0.58	-0.7
3,330,243	+		HP15_3176	0.58	-0.5
3,330,461	-		HP15_3176	0.83	-0.4
3,330,512	-		HP15_3176	0.89	-2.0
3,330,594	-				-1.0
3,330,677	+				+0.8
3,330,685	-				+0.3
3,330,692	-				-0.7
3,330,692	-				+0.4
3,330,780	+		HP15_3177	0.12	+0.1
3,330,901	-		HP15_3177	0.23	-0.7
3,331,178	+		HP15_3177	0.48	-1.9
3,331,218	+		HP15_3177	0.51	-0.4
3,331,218	+		HP15_3177	0.51	-0.7
3,331,226	-		HP15_3177	0.52	-0.9
3,331,260	-		HP15_3177	0.55	+0.2
3,331,280	-				-1.2
3,331,299	+		HP15_3177	0.58	-2.3
3,331,314	+		HP15_3177	0.60	-1.2
3,331,561	+		HP15_3177	0.82	-1.1
3,331,569	-		HP15_3177	0.82	-1.8
3,331,571	-		HP15_3177	0.83	-2.0
3,331,593	-		HP15_3177	0.84	-0.6
3,331,595	+		HP15_3177	0.85	-0.7
3,331,603	-		HP15_3177	0.85	+0.3
3,331,610	+		HP15_3177	0.86	+0.1
3,331,630	-		HP15_3177	0.88	-0.2
3,331,728	-				-0.5
3,331,772	-				+0.9
3,331,772	-				-1.1
3,331,825	+				+1.1
3,331,971	-		HP15_3178	0.11	-0.8
3,332,043	-		HP15_3178	0.17	+0.9
3,332,061	-		HP15_3178	0.18	-0.4
3,332,066	-		HP15_3178	0.19	-0.3
3,332,093	+		HP15_3178	0.21	-1.2
3,332,109	+		HP15_3178	0.22	-0.5
3,332,161	-		HP15_3178	0.26	-0.9
3,332,163	+		HP15_3178	0.26	-0.4
3,332,166	-		HP15_3178	0.27	+1.6
3,332,173	+		HP15_3178	0.27	+0.6
3,332,173	+		HP15_3178	0.27	-0.5
3,332,181	-		HP15_3178	0.28	+0.0
3,332,181	-		HP15_3178	0.28	-1.4
3,332,181	-		HP15_3178	0.28	+0.2
3,332,190	+		HP15_3178	0.29	+0.7
3,332,201	+		HP15_3178	0.30	-0.9
3,332,268	+		HP15_3178	0.35	-1.7
3,332,289	+		HP15_3178	0.37	-1.5
3,332,302	-		HP15_3178	0.38	-2.5
3,332,303	+		HP15_3178	0.38	+0.4
3,332,313	+		HP15_3178	0.39	-0.5
3,332,329	-		HP15_3178	0.40	-2.9
3,332,357	+		HP15_3178	0.42	+0.6
3,332,406	+		HP15_3178	0.46	+0.1
3,332,459	-		HP15_3178	0.50	+0.2
3,332,609	+		HP15_3178	0.63	-0.8
3,332,669	-		HP15_3178	0.67	-0.3
3,332,758	-		HP15_3178	0.75	+0.5