Strain Fitness in Marinobacter adhaerens HP15 around HP15_3150

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
3,302,832	-		HP15_3149	0.76	-1.1
3,302,852	-		HP15_3149	0.77	+0.4
3,302,862	+		HP15_3149	0.77	+0.1
3,302,877	-		HP15_3149	0.77	+0.2
3,302,877	-		HP15_3149	0.77	-1.9
3,302,943	-		HP15_3149	0.79	-0.7
3,302,947	-		HP15_3149	0.79	+0.2
3,303,018	+		HP15_3149	0.81	-1.5
3,303,028	+		HP15_3149	0.81	-0.2
3,303,150	+		HP15_3149	0.85	-0.4
3,303,158	-		HP15_3149	0.85	-0.2
3,303,158	-		HP15_3149	0.85	+0.2
3,303,334	+		HP15_3149	0.90	-0.3
3,303,403	-				+1.2
3,303,472	+				-0.7
3,303,484	+				+0.1
3,303,507	+				+0.5
3,303,508	-				-0.5
3,303,522	+				+0.6
3,303,620	+				+0.0
3,303,811	+				-0.4
3,304,011	-		HP15_3150	0.23	-0.4
3,304,068	+		HP15_3150	0.28	+0.6
3,304,086	-		HP15_3150	0.30	-0.1
3,304,091	-		HP15_3150	0.30	-0.5
3,304,236	+		HP15_3150	0.44	+1.5
3,304,236	+		HP15_3150	0.44	-0.1
3,304,244	-		HP15_3150	0.44	+2.8
3,304,413	-		HP15_3150	0.60	+0.5
3,304,457	-		HP15_3150	0.64	-0.4
3,304,555	+		HP15_3150	0.74	+0.2
3,304,589	-		HP15_3150	0.77	+0.5
3,304,624	-		HP15_3150	0.80	+0.7
3,304,831	+				-0.3
3,304,839	-				-0.6
3,304,899	+				-0.0
3,304,970	-				+1.3
3,304,990	+		HP15_3151	0.11	-1.0
3,304,997	+		HP15_3151	0.13	-0.7
3,305,005	-		HP15_3151	0.14	+0.4
3,305,007	-		HP15_3151	0.14	+0.3
3,305,013	+		HP15_3151	0.15	+0.8
3,305,021	-		HP15_3151	0.17	+0.2
3,305,042	+		HP15_3151	0.20	-0.3
3,305,144	+		HP15_3151	0.37	+1.4
3,305,268	-		HP15_3151	0.57	+1.6
3,305,333	+		HP15_3151	0.67	-0.2
3,305,367	+		HP15_3151	0.73	-0.0
3,305,367	+		HP15_3151	0.73	+0.2
3,305,375	-		HP15_3151	0.74	-0.4
3,305,375	-		HP15_3151	0.74	-0.4
3,305,397	+		HP15_3151	0.78	+0.7
3,305,411	+		HP15_3151	0.80	-1.4
3,305,436	+		HP15_3151	0.84	+0.1
3,305,436	+		HP15_3151	0.84	-0.7
3,305,439	-		HP15_3151	0.85	-0.5
3,305,444	-		HP15_3151	0.86	-0.1
3,305,511	-				-0.2
3,305,599	+				+0.6
3,305,601	+				+0.4
3,305,674	+		HP15_3152	0.18	-0.4
3,305,674	+		HP15_3152	0.18	-0.9
3,305,674	+		HP15_3152	0.18	-0.2
3,305,674	+		HP15_3152	0.18	-0.5
3,305,674	+		HP15_3152	0.18	+0.0
3,305,679	+		HP15_3152	0.19	+1.3
3,305,682	-		HP15_3152	0.19	+0.1
3,305,682	-		HP15_3152	0.19	-0.3
3,305,682	-		HP15_3152	0.19	+0.4
3,305,687	-		HP15_3152	0.19	-0.4
3,305,705	+		HP15_3152	0.21	+0.1
3,305,707	+		HP15_3152	0.22	+0.4
3,305,815	+		HP15_3152	0.34	-0.3