Strain Fitness in Marinobacter adhaerens HP15 around HP15_2582
Experiment: monoculture; Experiment A, time point 4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment A, time point 4 |
---|---|---|---|---|---|
remove | |||||
2,732,609 | + | HP15_2581 | 0.68 | -0.9 | |
2,732,664 | - | HP15_2581 | 0.70 | -0.7 | |
2,733,259 | + | -0.3 | |||
2,733,259 | + | -4.0 | |||
2,733,421 | + | -0.7 | |||
2,733,448 | - | -0.7 | |||
2,733,448 | - | -3.7 | |||
2,733,459 | + | -0.7 | |||
2,733,520 | + | -3.8 | |||
2,733,672 | + | HP15_2582 | 0.47 | -3.4 | |
2,733,710 | + | HP15_2582 | 0.57 | -1.7 | |
2,733,720 | - | HP15_2582 | 0.60 | -3.0 | |
2,733,728 | - | HP15_2582 | 0.62 | -1.3 | |
2,733,922 | - | -1.0 | |||
2,733,959 | + | -4.1 | |||
2,734,328 | - | HP15_2583 | 0.31 | +0.5 | |
2,734,422 | + | HP15_2583 | 0.37 | -3.4 | |
2,734,525 | - | HP15_2583 | 0.43 | +0.9 | |
2,734,537 | + | HP15_2583 | 0.44 | -4.4 | |
2,734,555 | + | HP15_2583 | 0.45 | -0.0 | |
2,734,837 | - | HP15_2583 | 0.64 | -3.0 |
Or see this region's nucleotide sequence