Strain Fitness in Marinobacter adhaerens HP15 around HP15_1301
Experiment: monoculture; Experiment A, time point 4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment A, time point 4 |
---|---|---|---|---|---|
remove | |||||
1,361,703 | + | HP15_1300 | 0.87 | +0.5 | |
1,361,703 | + | HP15_1300 | 0.87 | +1.8 | |
1,362,202 | + | HP15_1301 | 0.59 | +0.5 | |
1,362,202 | + | HP15_1301 | 0.59 | -1.6 | |
1,362,316 | + | HP15_1301 | 0.80 | -1.7 | |
1,362,321 | + | HP15_1301 | 0.81 | -2.6 | |
1,363,165 | + | +0.4 | |||
1,363,173 | - | +0.1 | |||
1,363,232 | - | +0.5 | |||
1,363,232 | - | -0.4 | |||
1,363,289 | - | HP15_1303 | 0.12 | +1.6 | |
1,363,361 | - | HP15_1303 | 0.21 | -0.2 | |
1,363,393 | + | HP15_1303 | 0.25 | -0.5 |
Or see this region's nucleotide sequence