Strain Fitness in Marinobacter adhaerens HP15 around HP15_4099

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
4,332,627	-		HP15_4098	0.30	+1.8
4,332,643	+		HP15_4098	0.32	+0.4
4,332,643	+		HP15_4098	0.32	+1.0
4,332,665	+		HP15_4098	0.34	-0.8
4,332,846	+		HP15_4098	0.49	-0.2
4,332,854	-		HP15_4098	0.49	+0.8
4,333,021	+		HP15_4098	0.63	+0.8
4,333,245	+		HP15_4098	0.82	+1.5
4,333,245	+		HP15_4098	0.82	-0.5
4,333,258	-		HP15_4098	0.83	-2.7
4,333,271	+		HP15_4098	0.84	+0.5
4,333,315	+		HP15_4098	0.87	-1.1
4,333,315	+		HP15_4098	0.87	+0.9
4,333,320	+		HP15_4098	0.88	-0.2
4,333,323	-		HP15_4098	0.88	+0.1
4,333,323	-		HP15_4098	0.88	-0.2
4,333,333	-		HP15_4098	0.89	-1.5
4,333,333	-		HP15_4098	0.89	+0.9
4,333,333	-		HP15_4098	0.89	+0.3
4,333,420	+				-0.1
4,333,449	-				+1.1
4,333,476	+				-0.9
4,333,512	+				-3.3
4,333,520	-				-1.4
4,333,551	-				+0.4
4,333,624	-		HP15_4099	0.18	+0.2
4,333,666	-		HP15_4099	0.23	-0.2
4,333,740	-		HP15_4099	0.33	+0.4
4,333,780	-		HP15_4099	0.38	+0.3
4,333,873	+		HP15_4099	0.49	-0.5
4,333,943	-		HP15_4099	0.58	+1.4
4,334,052	+		HP15_4099	0.71	-0.3
4,334,070	+		HP15_4099	0.73	+1.1
4,334,089	-		HP15_4099	0.76	+1.5
4,334,126	-		HP15_4099	0.80	-0.2
4,334,279	+				-1.1
4,334,331	-				+0.0
4,334,392	+				-0.3
4,334,400	-				-0.2
4,334,439	-				+0.6
4,334,444	-				-1.1
4,334,540	-		HP15_4100	0.15	+0.2
4,334,540	-		HP15_4100	0.15	-0.3
4,334,544	-		HP15_4100	0.15	+1.1
4,334,790	+		HP15_4100	0.29	-0.5
4,334,835	+		HP15_4100	0.31	+0.1
4,334,848	+		HP15_4100	0.32	-0.4
4,334,938	+		HP15_4100	0.37	-0.0
4,334,958	+		HP15_4100	0.38	+0.6
4,334,958	+		HP15_4100	0.38	-0.1
4,334,999	-		HP15_4100	0.40	+0.4
4,335,030	-		HP15_4100	0.42	+0.1
4,335,053	-		HP15_4100	0.43	+0.5
4,335,100	-		HP15_4100	0.46	-0.5
4,335,123	-		HP15_4100	0.47	-0.4
4,335,244	+		HP15_4100	0.54	-0.8