Strain Fitness in Marinobacter adhaerens HP15 around HP15_3863

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
4,087,752	-				-1.6
4,087,752	-				+0.2
4,087,766	+				-1.9
4,087,886	+				-0.6
4,087,976	-				+0.3
4,087,981	+				+0.3
4,087,999	-				+0.5
4,088,122	+		HP15_3863	0.12	-0.4
4,088,130	-		HP15_3863	0.12	+0.0
4,088,198	-		HP15_3863	0.18	-1.9
4,088,225	+		HP15_3863	0.20	-0.6
4,088,247	-		HP15_3863	0.21	-2.4
4,088,247	-		HP15_3863	0.21	+0.8
4,088,252	-		HP15_3863	0.22	+0.1
4,088,285	+		HP15_3863	0.24	-0.2
4,088,293	+		HP15_3863	0.25	-1.1
4,088,301	-		HP15_3863	0.26	+0.4
4,088,303	+		HP15_3863	0.26	-1.1
4,088,325	+		HP15_3863	0.28	+0.1
4,088,359	+		HP15_3863	0.30	-0.2
4,088,428	-		HP15_3863	0.36	-0.6
4,088,483	+		HP15_3863	0.40	+0.2
4,088,487	+		HP15_3863	0.40	-0.8
4,088,625	-		HP15_3863	0.51	-0.8
4,088,918	+		HP15_3863	0.74	+2.0
4,089,066	-		HP15_3863	0.85	+0.7
4,089,066	-		HP15_3863	0.85	-1.4
4,089,076	-		HP15_3863	0.86	+1.1
4,089,149	+				+0.1
4,089,273	-				+1.5
4,089,346	+				+0.1
4,089,354	-				-1.6
4,089,421	-				-0.6
4,089,421	-				-0.7
4,089,467	-				+0.2
4,089,467	-				-0.7
4,089,491	-				+1.0
4,089,547	+				+0.1
4,089,651	-		HP15_3864	0.11	-0.4
4,089,902	+		HP15_3864	0.20	-0.7
4,089,902	+		HP15_3864	0.20	+0.6
4,089,902	+		HP15_3864	0.20	-0.4
4,089,902	+		HP15_3864	0.20	+0.6
4,089,910	-		HP15_3864	0.20	+0.2
4,089,910	-		HP15_3864	0.20	+0.4
4,089,910	-		HP15_3864	0.20	+0.6
4,089,910	-		HP15_3864	0.20	-0.3
4,089,910	-		HP15_3864	0.20	+0.2
4,089,910	-		HP15_3864	0.20	-0.2
4,089,940	+		HP15_3864	0.21	+0.1
4,090,061	+		HP15_3864	0.26	+1.0
4,090,069	-		HP15_3864	0.26	+0.0
4,090,118	+		HP15_3864	0.28	-0.2
4,090,131	-		HP15_3864	0.28	-0.0