Strain Fitness in Marinobacter adhaerens HP15 around HP15_3249

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
3,401,510	+		HP15_3247	0.80	-0.6
3,401,518	-		HP15_3247	0.80	-0.6
3,401,605	-		HP15_3247	0.88	-0.3
3,401,656	+				-0.4
3,401,702	+				-0.2
3,401,722	-				-0.4
3,401,745	-				-0.6
3,401,783	-				-0.4
3,401,882	-				-0.8
3,402,107	+		HP15_3248	0.50	-0.2
3,402,214	-		HP15_3248	0.70	+0.3
3,402,268	+		HP15_3248	0.80	+0.5
3,402,313	-		HP15_3248	0.88	-1.6
3,402,340	-				-0.8
3,402,341	+				-0.7
3,402,341	+				-0.8
3,402,349	-				+0.2
3,402,442	-				-3.0
3,402,668	+		HP15_3249	0.23	+0.2
3,402,678	+		HP15_3249	0.23	-0.7
3,402,702	+		HP15_3249	0.25	+0.7
3,402,907	-		HP15_3249	0.41	-1.2
3,402,917	-		HP15_3249	0.42	-0.2
3,403,033	+		HP15_3249	0.51	-1.5
3,403,070	+		HP15_3249	0.54	-1.8
3,403,118	+		HP15_3249	0.57	-0.5
3,403,231	-		HP15_3249	0.66	-1.0
3,403,240	-		HP15_3249	0.67	-0.8
3,403,242	+		HP15_3249	0.67	-0.8
3,403,265	-		HP15_3249	0.69	-0.8
3,403,275	-		HP15_3249	0.70	-1.6
3,403,348	-		HP15_3249	0.75	+0.8
3,403,476	+		HP15_3249	0.85	+0.8
3,403,476	-		HP15_3249	0.85	-2.2
3,403,484	-		HP15_3249	0.86	-0.1
3,403,673	+				-0.4
3,403,686	+				-0.7
3,403,857	+				+1.4
3,403,873	+				-0.3
3,403,873	+				-0.8
3,403,909	+				-0.6
3,403,951	+				-0.3
3,403,998	+				-2.4
3,404,130	+		HP15_3250	0.18	+0.3
3,404,181	+		HP15_3250	0.22	-1.6
3,404,189	-		HP15_3250	0.22	+0.4
3,404,205	+		HP15_3250	0.24	+0.7
3,404,245	-		HP15_3250	0.27	-0.1
3,404,283	+		HP15_3250	0.30	+0.3
3,404,348	-		HP15_3250	0.35	+0.5
3,404,357	+		HP15_3250	0.35	-1.8
3,404,415	+		HP15_3250	0.40	+0.8
3,404,447	+		HP15_3250	0.42	-0.3
3,404,447	+		HP15_3250	0.42	-0.4
3,404,447	+		HP15_3250	0.42	-0.6
3,404,455	-		HP15_3250	0.43	-0.2
3,404,506	-		HP15_3250	0.47	+0.3
3,404,506	-		HP15_3250	0.47	-0.1
3,404,632	-		HP15_3250	0.56	-0.7