Strain Fitness in Marinobacter adhaerens HP15 around HP15_321
Experiment: monoculture; Experiment A, time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment A, time point 3 |
---|---|---|---|---|---|
remove | |||||
316,818 | - | HP15_319 | 0.16 | -0.9 | |
316,959 | - | HP15_319 | 0.40 | -0.8 | |
316,962 | + | HP15_319 | 0.40 | -0.2 | |
317,041 | + | HP15_319 | 0.54 | +0.2 | |
317,122 | + | HP15_319 | 0.67 | +0.6 | |
317,194 | - | HP15_319 | 0.80 | -0.6 | |
317,248 | + | HP15_319 | 0.89 | +0.7 | |
317,390 | + | +1.5 | |||
317,803 | + | -1.9 | |||
317,878 | - | HP15_321 | 0.13 | -4.1 | |
317,928 | + | HP15_321 | 0.23 | -4.3 | |
318,116 | - | HP15_321 | 0.58 | -4.1 | |
318,278 | + | HP15_321 | 0.89 | -2.1 | |
318,291 | + | -1.7 |
Or see this region's nucleotide sequence