Strain Fitness in Marinobacter adhaerens HP15 around HP15_108

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
110,621	+		HP15_106	0.70	-0.6
110,665	+		HP15_106	0.74	-0.0
110,732	+		HP15_106	0.79	-0.0
110,732	+		HP15_106	0.79	+0.8
110,740	-		HP15_106	0.80	-0.6
110,779	+		HP15_106	0.83	-0.5
110,779	+		HP15_106	0.83	+0.9
110,787	-		HP15_106	0.84	+0.5
110,804	+		HP15_106	0.85	+0.8
110,819	-		HP15_106	0.86	-0.2
110,842	+		HP15_106	0.88	+0.3
110,850	-		HP15_106	0.89	+0.2
110,884	+				-1.0
110,894	+				+1.8
110,902	-				-0.3
110,910	+				-1.1
110,918	-				+0.6
110,918	-				+0.7
110,979	+				-0.7
110,987	-				+0.8
111,037	+				-0.3
111,037	+				-1.6
111,037	+				+0.0
111,040	-				+0.9
111,045	-				-1.9
111,045	-				+0.5
111,063	-				+0.8
111,121	-				-0.3
111,132	-				+0.7
111,146	-				-0.1
111,251	-				+0.9
111,314	-		HP15_107	0.20	-0.2
111,338	-		HP15_107	0.29	+1.0
111,399	-		HP15_107	0.52	-1.0
111,436	-		HP15_107	0.66	+0.7
111,498	+				-0.5
111,508	+				+0.4
111,558	+				-0.2
111,568	+				-0.2
111,574	+				-0.2
111,576	-				+0.8
111,576	-				+0.6
111,577	-				+0.9
111,598	+				+0.7
111,611	-				-2.1
111,641	-		HP15_108	0.11	-0.2
111,683	+		HP15_108	0.15	-0.6
111,698	-		HP15_108	0.16	-0.7
111,706	+		HP15_108	0.17	+1.4
111,825	-		HP15_108	0.28	+0.6
111,831	-		HP15_108	0.28	-1.1
111,838	+		HP15_108	0.29	-0.4
111,862	-		HP15_108	0.31	+0.0
111,878	+		HP15_108	0.32	-0.4
111,911	-		HP15_108	0.35	-0.1
111,935	+		HP15_108	0.38	-0.1
111,985	+		HP15_108	0.42	-0.5
112,003	-		HP15_108	0.44	-1.8
112,008	-		HP15_108	0.44	+0.0
112,011	+		HP15_108	0.45	-0.5
112,024	-		HP15_108	0.46	-0.6
112,024	-		HP15_108	0.46	-0.3
112,028	+		HP15_108	0.46	-0.9
112,028	+		HP15_108	0.46	-0.5
112,028	+		HP15_108	0.46	-1.1
112,083	-		HP15_108	0.51	-1.0
112,093	-		HP15_108	0.52	+0.1
112,151	+		HP15_108	0.57	-1.6
112,175	+		HP15_108	0.59	-0.2
112,249	-		HP15_108	0.66	+0.2
112,360	+		HP15_108	0.76	-0.5
112,378	-		HP15_108	0.78	-0.5
112,480	+		HP15_108	0.87	-0.3
112,488	-		HP15_108	0.88	-0.8
112,547	+				-0.2
112,547	+				-0.5
112,610	-				+0.6
112,649	+				-1.0
112,718	+				-0.3
112,724	-				+0.5
112,770	+				+0.8
112,796	+		HP15_109	0.11	+0.8
112,797	-		HP15_109	0.11	-1.0
112,823	+		HP15_109	0.13	-0.0
112,826	-		HP15_109	0.13	+0.8
112,828	+		HP15_109	0.13	+0.8
112,831	-		HP15_109	0.14	-0.3
112,831	-		HP15_109	0.14	-0.2
112,831	-		HP15_109	0.14	+0.1
112,856	+		HP15_109	0.16	+1.0
112,856	+		HP15_109	0.16	-1.3
112,856	+		HP15_109	0.16	-0.5
112,864	-		HP15_109	0.16	+1.2
112,864	-		HP15_109	0.16	+0.1
112,964	-		HP15_109	0.25	+0.1
113,010	+		HP15_109	0.29	-0.2
113,028	-		HP15_109	0.30	-0.7
113,028	-		HP15_109	0.30	-1.6
113,028	-		HP15_109	0.30	-0.4
113,033	-		HP15_109	0.31	+1.1
113,131	+		HP15_109	0.39	-0.4
113,255	+		HP15_109	0.49	-0.9
113,287	-		HP15_109	0.52	-0.5
113,292	-		HP15_109	0.53	+0.8
113,297	-		HP15_109	0.53	-2.9
113,320	+		HP15_109	0.55	+0.1
113,327	+		HP15_109	0.56	+0.4
113,334	-		HP15_109	0.56	+0.5
113,336	+		HP15_109	0.56	+0.7
113,336	+		HP15_109	0.56	-1.0
113,349	-		HP15_109	0.57	+0.2
113,368	+		HP15_109	0.59	-0.3
113,434	+		HP15_109	0.65	+0.5
113,434	+		HP15_109	0.65	-2.0
113,434	+		HP15_109	0.65	+0.8
113,474	+		HP15_109	0.68	-0.2
113,492	+		HP15_109	0.69	-1.3
113,539	+		HP15_109	0.73	-1.9