Strain Fitness in Marinobacter adhaerens HP15 around HP15_4059

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
4,291,111	+		HP15_4056	0.53	+0.1
4,291,111	+		HP15_4056	0.53	+0.4
4,291,170	+		HP15_4056	0.70	+0.6
4,291,170	+		HP15_4056	0.70	-0.6
4,291,204	+		HP15_4056	0.80	+0.7
4,291,258	+				+0.3
4,291,346	-		HP15_4057	0.17	+0.1
4,291,368	+		HP15_4057	0.23	+0.5
4,291,641	-				+0.2
4,291,679	-				-0.4
4,291,690	+				+0.0
4,291,692	-				+0.9
4,291,709	+				+0.3
4,291,709	+				-0.3
4,291,851	+		HP15_4058	0.28	-0.8
4,291,858	+		HP15_4058	0.30	-2.0
4,291,922	+		HP15_4058	0.47	+0.5
4,291,922	+		HP15_4058	0.47	-1.2
4,291,954	+		HP15_4058	0.55	-0.4
4,291,962	-		HP15_4058	0.58	-0.2
4,291,966	+		HP15_4058	0.59	+0.7
4,292,003	+		HP15_4058	0.69	-0.1
4,292,003	+		HP15_4058	0.69	+0.1
4,292,003	+		HP15_4058	0.69	+0.1
4,292,003	+		HP15_4058	0.69	+0.0
4,292,003	+		HP15_4058	0.69	-1.6
4,292,005	+		HP15_4058	0.69	-1.7
4,292,011	-		HP15_4058	0.71	-0.2
4,292,030	-		HP15_4058	0.76	-0.8
4,292,159	+				+0.7
4,292,303	-		HP15_4059	0.15	-0.1
4,292,402	+		HP15_4059	0.22	+0.1
4,292,402	+		HP15_4059	0.22	+0.8
4,292,410	-		HP15_4059	0.23	-0.9
4,292,532	+		HP15_4059	0.32	-0.9
4,292,540	-		HP15_4059	0.32	-0.2
4,292,609	+		HP15_4059	0.37	-0.5
4,292,686	+		HP15_4059	0.43	-0.2
4,292,724	-		HP15_4059	0.46	+0.3
4,292,726	+		HP15_4059	0.46	+0.1
4,292,734	-		HP15_4059	0.47	-0.3
4,292,764	+		HP15_4059	0.49	-0.7
4,292,838	+		HP15_4059	0.54	-0.5
4,292,838	+		HP15_4059	0.54	-0.5
4,292,846	-		HP15_4059	0.55	-0.4
4,292,846	-		HP15_4059	0.55	-0.1
4,292,886	+		HP15_4059	0.58	+0.6
4,292,894	-		HP15_4059	0.58	+0.5
4,292,980	-		HP15_4059	0.65	-0.5
4,293,044	-		HP15_4059	0.69	+0.6
4,293,055	-		HP15_4059	0.70	-0.4
4,293,081	+		HP15_4059	0.72	-0.8
4,293,104	+		HP15_4059	0.74	-0.1
4,293,171	+		HP15_4059	0.79	-0.0
4,293,222	+		HP15_4059	0.83	-0.3
4,293,230	-		HP15_4059	0.83	+1.4
4,293,230	-		HP15_4059	0.83	-0.2
4,293,240	-		HP15_4059	0.84	+0.9
4,293,256	-		HP15_4059	0.85	-0.6
4,293,306	-		HP15_4059	0.89	-0.6
4,293,306	-		HP15_4059	0.89	-0.1
4,293,388	+				+2.6
4,293,451	-				-1.3
4,293,558	-				-0.3
4,293,581	+				-0.6
4,293,623	-				+0.3
4,293,653	-				-0.3
4,293,793	+				+0.0
4,293,795	-				+0.0
4,293,829	-				+0.8
4,293,835	+				+0.3
4,293,903	+		HP15_4060	0.11	-0.3
4,293,999	+		HP15_4060	0.17	+0.5
4,294,010	+		HP15_4060	0.18	-0.3
4,294,015	-		HP15_4060	0.18	+0.4
4,294,029	+		HP15_4060	0.19	+0.3
4,294,034	-		HP15_4060	0.19	-1.4
4,294,037	-		HP15_4060	0.19	+0.9
4,294,076	+		HP15_4060	0.22	-0.6
4,294,171	-		HP15_4060	0.28	+1.1
4,294,220	-		HP15_4060	0.31	-0.6
4,294,289	+		HP15_4060	0.35	+0.6
4,294,291	-		HP15_4060	0.35	+0.5
4,294,314	+		HP15_4060	0.36	+0.1
4,294,322	-		HP15_4060	0.37	+0.0