Strain Fitness in Marinobacter adhaerens HP15 around HP15_3530

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
3,716,404	+		HP15_3528	0.80	+0.1
3,716,404	+		HP15_3528	0.80	-1.3
3,716,404	+		HP15_3528	0.80	-1.1
3,716,410	-		HP15_3528	0.81	+1.6
3,716,412	-		HP15_3528	0.81	+0.2
3,716,412	-		HP15_3528	0.81	+0.0
3,716,412	-		HP15_3528	0.81	-0.1
3,716,412	-		HP15_3528	0.81	+0.4
3,716,459	+		HP15_3528	0.85	+0.9
3,716,484	-		HP15_3528	0.87	-1.0
3,716,528	+				-0.4
3,716,534	+				-0.0
3,716,599	+				-0.1
3,716,638	+				-0.1
3,716,748	+		HP15_3529	0.14	-4.4
3,716,778	+		HP15_3529	0.19	-7.1
3,716,784	-		HP15_3529	0.21	-4.9
3,716,961	+		HP15_3529	0.52	-3.3
3,716,961	+		HP15_3529	0.52	-6.0
3,716,969	-		HP15_3529	0.53	-5.7
3,716,969	-		HP15_3529	0.53	-3.6
3,716,980	-		HP15_3529	0.55	-6.7
3,717,051	+		HP15_3529	0.67	-4.9
3,717,099	+		HP15_3529	0.76	-5.8
3,717,240	+				-1.6
3,717,384	-		HP15_3530	0.33	+0.4
3,717,386	+		HP15_3530	0.33	+0.3
3,717,405	+		HP15_3530	0.38	-0.0
3,717,406	+		HP15_3530	0.39	+0.5
3,717,432	+		HP15_3530	0.46	+1.3
3,717,487	+		HP15_3530	0.60	+0.2
3,717,503	-		HP15_3530	0.65	+0.9
3,717,505	-		HP15_3530	0.65	+1.9
3,717,512	-		HP15_3530	0.67	-0.0
3,717,518	-		HP15_3530	0.69	+3.5
3,717,519	+		HP15_3530	0.69	+1.7
3,717,519	+		HP15_3530	0.69	+0.6
3,717,519	+		HP15_3530	0.69	-0.1
3,717,519	+		HP15_3530	0.69	+1.3
3,717,519	+		HP15_3530	0.69	-0.0
3,717,527	-		HP15_3530	0.71	+0.8
3,717,527	-		HP15_3530	0.71	-0.1
3,717,527	-		HP15_3530	0.71	+0.7
3,717,527	-		HP15_3530	0.71	+0.2
3,717,563	+		HP15_3530	0.81	+0.9
3,717,663	-				-0.1
3,717,866	-		HP15_3531	0.47	+0.6
3,718,011	+		HP15_3531	0.80	-0.1
3,718,098	-				+1.3
3,718,100	-				-1.9
3,718,105	-				-0.3
3,718,282	+				+0.1
3,718,282	+				+0.8
3,718,340	-				-0.4
3,718,361	+				+0.2
3,718,363	+				-0.4
3,718,366	+				+0.2
3,718,369	-				+0.4
3,718,433	+				-0.0
3,718,439	+				-0.8
3,718,473	+		HP15_3532	0.11	+0.2
3,718,541	-		HP15_3532	0.17	+0.4
3,718,570	-		HP15_3532	0.19	+0.0
3,718,578	+		HP15_3532	0.20	-0.4
3,718,598	-		HP15_3532	0.21	+0.7
3,718,598	-		HP15_3532	0.21	+0.4