Strain Fitness in Marinobacter adhaerens HP15 around HP15_1855

Experiment: monoculture; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 2
1,954,147	+				+0.2
1,954,198	-				-1.2
1,954,246	-				-0.4
1,954,262	-				+0.6
1,954,290	+				-0.5
1,954,393	-				+0.2
1,954,393	-				+1.2
1,954,480	-		HP15_1855	0.12	-0.2
1,954,559	-		HP15_1855	0.14	-0.0
1,954,643	+		HP15_1855	0.17	+0.5
1,954,705	-		HP15_1855	0.20	-1.3
1,954,764	+		HP15_1855	0.22	+0.1
1,954,772	-		HP15_1855	0.22	+0.6
1,954,777	-		HP15_1855	0.22	-0.2
1,954,852	-		HP15_1855	0.25	+0.7
1,954,973	+		HP15_1855	0.29	+0.5
1,954,999	-		HP15_1855	0.30	+0.9
1,955,052	+		HP15_1855	0.32	+0.4
1,955,057	+		HP15_1855	0.32	+0.7
1,955,057	+		HP15_1855	0.32	+0.5
1,955,096	+		HP15_1855	0.34	+1.2
1,955,184	+		HP15_1855	0.37	+0.3
1,955,197	+		HP15_1855	0.37	+0.4
1,955,207	+		HP15_1855	0.38	-0.5
1,955,355	+		HP15_1855	0.43	+0.4
1,955,402	+		HP15_1855	0.45	-0.8
1,955,410	-		HP15_1855	0.45	-0.3
1,955,455	+		HP15_1855	0.47	+1.0
1,955,459	+		HP15_1855	0.47	+0.9
1,955,495	+		HP15_1855	0.48	+0.2
1,955,503	-		HP15_1855	0.48	+0.6
1,955,550	+		HP15_1855	0.50	+0.4
1,955,579	-		HP15_1855	0.51	-0.4
1,955,653	-		HP15_1855	0.54	-0.4
1,955,730	+		HP15_1855	0.56	+0.1
1,955,744	+		HP15_1855	0.57	+0.6
1,955,746	+		HP15_1855	0.57	-0.1
1,955,806	+		HP15_1855	0.59	-0.6
1,955,925	-		HP15_1855	0.63	+0.6
1,955,925	-		HP15_1855	0.63	-0.0
1,955,925	-		HP15_1855	0.63	-0.5
1,955,950	-		HP15_1855	0.64	+0.1
1,955,969	+		HP15_1855	0.65	+0.3
1,956,236	+		HP15_1855	0.74	+0.1
1,956,604	+		HP15_1855	0.88	-2.3
1,956,719	+				-0.4
1,956,719	+				+0.4
1,956,778	-				+0.7
1,956,899	+				+0.0
1,957,121	+				+0.7
1,957,155	-				-0.3
1,957,164	+				-0.3
1,957,258	+				-0.1
1,957,315	+				+0.1
1,957,315	+				-0.2
1,957,320	+				-0.3
1,957,355	+				-2.0
1,957,550	-		HP15_1856	0.15	-0.3
1,957,555	+		HP15_1856	0.16	+0.9
1,957,568	-		HP15_1856	0.16	-1.0
1,957,712	+		HP15_1856	0.23	-0.1
1,957,712	+		HP15_1856	0.23	-0.1
1,957,720	-		HP15_1856	0.23	-0.7
1,957,796	-		HP15_1856	0.26	+0.1
1,957,854	-		HP15_1856	0.29	-0.6
1,957,906	-		HP15_1856	0.31	+0.3
1,957,920	-		HP15_1856	0.32	+0.4
1,957,920	-		HP15_1856	0.32	-0.4
1,957,920	-		HP15_1856	0.32	+0.3