Strain Fitness in Marinobacter adhaerens HP15 around HP15_1480
Experiment: monoculture; Experiment A, time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment A, time point 2 |
---|---|---|---|---|---|
remove | |||||
1,555,385 | - | HP15_1479 | 0.16 | -0.9 | |
1,555,385 | - | HP15_1479 | 0.16 | -0.4 | |
1,555,401 | + | HP15_1479 | 0.17 | -1.3 | |
1,555,409 | - | HP15_1479 | 0.18 | -1.0 | |
1,555,455 | + | HP15_1479 | 0.22 | -0.9 | |
1,555,455 | + | HP15_1479 | 0.22 | -1.7 | |
1,555,455 | + | HP15_1479 | 0.22 | -0.5 | |
1,555,460 | + | HP15_1479 | 0.23 | -2.2 | |
1,555,463 | - | HP15_1479 | 0.23 | -1.1 | |
1,555,463 | - | HP15_1479 | 0.23 | -0.9 | |
1,555,463 | - | HP15_1479 | 0.23 | -1.4 | |
1,555,463 | - | HP15_1479 | 0.23 | -1.1 | |
1,555,931 | + | HP15_1479 | 0.65 | +1.1 | |
1,556,000 | - | HP15_1479 | 0.71 | -0.1 | |
1,556,071 | - | HP15_1479 | 0.77 | -1.3 | |
1,556,278 | + | +0.1 | |||
1,556,278 | + | -0.5 | |||
1,556,556 | + | HP15_1480 | 0.55 | +1.1 |
Or see this region's nucleotide sequence