Strain Fitness in Marinobacter adhaerens HP15 around HP15_4142

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
4,374,651	-		HP15_4141	0.15	+0.4
4,374,725	-		HP15_4141	0.22	+1.5
4,374,781	-		HP15_4141	0.27	-0.1
4,374,781	-		HP15_4141	0.27	-0.2
4,374,797	+		HP15_4141	0.28	+0.1
4,374,804	-		HP15_4141	0.29	+1.4
4,374,926	+		HP15_4141	0.39	-1.4
4,374,926	+		HP15_4141	0.39	-0.5
4,375,047	-		HP15_4141	0.50	+1.0
4,375,073	+		HP15_4141	0.52	-0.3
4,375,098	+		HP15_4141	0.55	-0.0
4,375,098	+		HP15_4141	0.55	+0.6
4,375,117	-		HP15_4141	0.56	+0.8
4,375,210	+		HP15_4141	0.64	+0.9
4,375,304	+		HP15_4141	0.73	+0.4
4,375,337	+		HP15_4141	0.76	+0.6
4,375,358	+		HP15_4141	0.77	-2.7
4,375,565	+				+1.7
4,375,565	+				+0.4
4,375,573	-				+0.5
4,375,698	+				+0.2
4,375,726	+		HP15_4142	0.11	-0.9
4,375,854	+		HP15_4142	0.27	+0.3
4,375,884	+		HP15_4142	0.31	-0.2
4,375,892	-		HP15_4142	0.32	+0.1
4,375,901	+		HP15_4142	0.33	-1.4
4,376,068	-		HP15_4142	0.55	-0.6
4,376,131	+		HP15_4142	0.63	-0.2
4,376,185	+		HP15_4142	0.70	-0.4
4,376,185	+		HP15_4142	0.70	-0.9
4,376,185	+		HP15_4142	0.70	+0.4
4,376,185	+		HP15_4142	0.70	-0.2
4,376,185	+		HP15_4142	0.70	-0.2
4,376,193	-		HP15_4142	0.71	-0.5
4,376,193	-		HP15_4142	0.71	+0.0
4,376,198	+		HP15_4142	0.71	-0.3
4,376,307	-		HP15_4142	0.85	-0.0
4,376,317	+		HP15_4142	0.86	+0.0
4,376,322	+		HP15_4142	0.87	-0.5
4,376,327	+		HP15_4142	0.88	-0.2
4,376,340	-		HP15_4142	0.89	-0.7
4,376,351	-				+0.8
4,376,426	-				+1.4
4,376,439	-				+0.3
4,376,491	+				+0.5
4,376,494	-				-0.3
4,376,541	+		HP15_4143	0.11	+0.5
4,376,546	+		HP15_4143	0.11	+0.4
4,376,554	-		HP15_4143	0.12	-0.5
4,376,605	-		HP15_4143	0.19	+0.4
4,376,647	-		HP15_4143	0.24	-0.6
4,376,647	-		HP15_4143	0.24	-0.6
4,376,652	-		HP15_4143	0.25	+0.1
4,376,664	+		HP15_4143	0.26	-0.6
4,376,672	-		HP15_4143	0.27	+0.6
4,376,674	+		HP15_4143	0.27	+1.2
4,376,728	-		HP15_4143	0.34	-0.2
4,376,733	-		HP15_4143	0.35	+0.4
4,376,747	-		HP15_4143	0.37	+0.2
4,376,782	+		HP15_4143	0.41	-0.4
4,376,782	+		HP15_4143	0.41	+0.6
4,376,812	-		HP15_4143	0.45	-0.4
4,376,837	-		HP15_4143	0.48	+0.7
4,376,918	+		HP15_4143	0.58	-0.0
4,376,918	+		HP15_4143	0.58	-0.4
4,376,926	-		HP15_4143	0.59	-0.3
4,377,086	-		HP15_4143	0.79	+0.5
4,377,088	+		HP15_4143	0.79	+0.8
4,377,091	-		HP15_4143	0.80	-0.0
4,377,096	-		HP15_4143	0.80	+0.1
4,377,112	+		HP15_4143	0.82	-1.1
4,377,120	-		HP15_4143	0.83	-0.2
4,377,256	+				-0.4
4,377,256	+				+0.3
4,377,256	+				+0.5
4,377,264	-				+0.7
4,377,275	+				-0.2
4,377,289	+				-0.5
4,377,297	-				+0.2
4,377,297	-				-0.7
4,377,381	-				+0.9
4,377,412	+				+2.0
4,377,412	+				-0.3
4,377,412	+				+0.4
4,377,415	-				+0.6
4,377,420	-				-1.0
4,377,420	-				-1.0
4,377,420	-				-1.8
4,377,420	-				-0.8
4,377,420	-				+0.3
4,377,422	+				-0.2
4,377,422	+				+1.1