Strain Fitness in Marinobacter adhaerens HP15 around HP15_4052

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
4,286,078	-				+0.4
4,286,078	-				+0.1
4,286,078	-				+0.2
4,286,110	-				+0.1
4,286,151	+				+0.1
4,286,196	+				+0.5
4,286,621	+		HP15_4051	0.68	-0.4
4,286,629	-		HP15_4051	0.70	-0.0
4,286,637	-		HP15_4051	0.72	-1.4
4,286,651	-		HP15_4051	0.75	-0.0
4,286,826	-				+0.0
4,286,991	+		HP15_4052	0.23	-0.8
4,287,019	+		HP15_4052	0.25	+0.7
4,287,037	-		HP15_4052	0.27	-0.7
4,287,044	+		HP15_4052	0.28	+0.9
4,287,224	-		HP15_4052	0.47	+0.3
4,287,247	+		HP15_4052	0.49	-1.4
4,287,264	+		HP15_4052	0.51	+0.3
4,287,474	+		HP15_4052	0.73	-0.4
4,287,497	+		HP15_4052	0.76	+1.2
4,287,503	+				-1.1
4,287,521	+		HP15_4052	0.78	-1.3
4,287,539	+		HP15_4052	0.80	-1.7
4,287,547	+		HP15_4052	0.81	+0.4
4,287,583	-		HP15_4052	0.85	-0.5
4,287,616	-		HP15_4052	0.88	-1.2
4,287,651	-				+0.5
4,287,818	+				-1.0
4,287,826	-				-0.7
4,287,826	-				-0.1
4,287,826	-				-1.4
4,287,833	-				-0.0
4,287,862	+				-1.2
4,287,870	+				-0.6
4,287,875	+				-0.3
4,287,897	-				-0.3
4,287,906	-				-1.1
4,287,953	-		HP15_4053	0.11	-0.3
4,288,015	-		HP15_4053	0.16	+0.6
4,288,044	-		HP15_4053	0.18	-0.1
4,288,047	-		HP15_4053	0.18	+1.1
4,288,047	-		HP15_4053	0.18	+1.3
4,288,061	+		HP15_4053	0.19	-0.5
4,288,088	+		HP15_4053	0.21	-0.2
4,288,129	-		HP15_4053	0.24	+1.2
4,288,151	-		HP15_4053	0.26	-0.1
4,288,363	+		HP15_4053	0.42	-0.2
4,288,371	+		HP15_4053	0.42	+1.1
4,288,441	-		HP15_4053	0.48	+0.2
4,288,481	+		HP15_4053	0.51	-1.2
4,288,491	+		HP15_4053	0.51	-1.9
4,288,498	-		HP15_4053	0.52	+0.1
4,288,500	+		HP15_4053	0.52	-2.4
4,288,525	+		HP15_4053	0.54	+0.0
4,288,537	+		HP15_4053	0.55	-0.6
4,288,577	-		HP15_4053	0.58	-0.3
4,288,579	+		HP15_4053	0.58	-0.1
4,288,591	+		HP15_4053	0.59	+0.7
4,288,599	-		HP15_4053	0.59	-0.9
4,288,663	+		HP15_4053	0.64	-1.0
4,288,704	+		HP15_4053	0.67	+0.4
4,288,704	+		HP15_4053	0.67	+0.2
4,288,704	+		HP15_4053	0.67	+0.4
4,288,706	-		HP15_4053	0.67	+0.7
4,288,712	-		HP15_4053	0.68	-0.1
4,288,712	-		HP15_4053	0.68	+0.0
4,288,712	-		HP15_4053	0.68	-0.3
4,288,718	-		HP15_4053	0.68	+1.7