Strain Fitness in Marinobacter adhaerens HP15 around HP15_3455

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,635,145	-		HP15_3453	0.82	+0.7
3,635,221	+				+0.4
3,635,345	+				-0.0
3,635,345	+				+0.5
3,635,353	-				+3.0
3,635,355	+				-0.9
3,635,530	-		HP15_3454	0.30	-0.5
3,635,632	+		HP15_3454	0.47	+0.1
3,635,655	-		HP15_3454	0.51	+0.5
3,635,655	-		HP15_3454	0.51	-2.2
3,635,833	-		HP15_3454	0.82	-0.7
3,635,855	+		HP15_3454	0.86	+0.2
3,635,863	-		HP15_3454	0.87	-0.8
3,635,863	-		HP15_3454	0.87	+0.7
3,635,863	-		HP15_3454	0.87	-1.3
3,635,868	-		HP15_3454	0.88	-0.6
3,635,900	-				+0.3
3,635,900	-				+1.0
3,635,910	-				-2.4
3,635,953	-				-0.2
3,636,012	-				-0.7
3,636,015	-				+0.8
3,636,051	+				-1.4
3,636,210	+				-0.1
3,636,251	+		HP15_3455	0.12	-0.3
3,636,297	+		HP15_3455	0.16	-0.5
3,636,374	-		HP15_3455	0.22	+0.3
3,636,376	+		HP15_3455	0.22	-1.3
3,636,383	+		HP15_3455	0.22	-0.0
3,636,448	-		HP15_3455	0.28	+0.6
3,636,448	-		HP15_3455	0.28	-0.2
3,636,448	-		HP15_3455	0.28	+1.9
3,636,449	-		HP15_3455	0.28	-1.0
3,636,469	+		HP15_3455	0.29	+0.2
3,636,481	-		HP15_3455	0.30	-0.0
3,636,482	-		HP15_3455	0.30	+0.8
3,636,483	+		HP15_3455	0.30	-0.4
3,636,527	+		HP15_3455	0.34	+0.2
3,636,535	-		HP15_3455	0.34	+1.3
3,636,557	-		HP15_3455	0.36	+1.5
3,636,557	-		HP15_3455	0.36	-0.6
3,636,571	-		HP15_3455	0.37	-0.2
3,636,579	+		HP15_3455	0.38	+0.0
3,636,638	-		HP15_3455	0.42	-0.5
3,636,704	+		HP15_3455	0.48	-0.2
3,636,704	+		HP15_3455	0.48	-0.1
3,636,722	-		HP15_3455	0.49	+0.7
3,636,755	+		HP15_3455	0.52	+1.6
3,636,763	-		HP15_3455	0.52	+0.9
3,636,774	+		HP15_3455	0.53	-1.7
3,636,782	-		HP15_3455	0.54	-0.2
3,636,813	+		HP15_3455	0.56	+0.2
3,636,821	-		HP15_3455	0.57	+1.1
3,636,944	-		HP15_3455	0.66	-0.2
3,637,111	+		HP15_3455	0.80	-0.3
3,637,119	-		HP15_3455	0.80	+0.1
3,637,307	+				-0.4
3,637,329	+				-1.0
3,637,334	+				+0.1
3,637,572	-		HP15_3456	0.39	-0.0
3,637,737	+				+0.1
3,637,739	+				-0.7
3,637,739	+				-0.4
3,637,739	+				+0.9
3,637,745	-				+1.3
3,637,747	-				-0.2
3,637,747	-				-0.5
3,637,783	-				-0.7
3,637,794	-				-0.2
3,637,804	+				-0.2
3,637,804	+				+0.5
3,637,812	-				+1.3
3,637,812	-				-0.1
3,637,990	+		HP15_3457	0.17	-0.2
3,638,034	+		HP15_3457	0.22	+0.7
3,638,034	+		HP15_3457	0.22	-1.4
3,638,120	-		HP15_3457	0.32	-0.8
3,638,142	-		HP15_3457	0.35	-0.6
3,638,163	+		HP15_3457	0.37	+0.7
3,638,199	-		HP15_3457	0.41	+0.2
3,638,213	-		HP15_3457	0.43	-0.1
3,638,237	+		HP15_3457	0.46	+0.5
3,638,303	-		HP15_3457	0.54	+0.3
3,638,360	+		HP15_3457	0.60	-0.5